RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 PRAC2D3DTV9 90 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 ZNF253O75346 499 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 MPC2O95563 127 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 PET100P0DJ07 73 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 OR10J6PQ8NGY7 276 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
UBXN11-208ENST00000421827 BIRC6Q9NR09 4857 aa12.88□□□□□ -0.35
UBXN11-208ENST00000421827 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 PRM2P04554 102 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 CDKN1BP46527 198 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 OXA1LQ15070 435 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 LINC01587Q99440 93 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 KCNIP2Q9NS61 270 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
UBXN11-208ENST00000421827 HIST1H1EP10412 219 aaKnown RBP12.86□□□□□ -0.35
UBXN11-208ENST00000421827 TSPOP30536 169 aa12.86□□□□□ -0.35
UBXN11-208ENST00000421827 ATP5SQ99766 215 aa12.86□□□□□ -0.35
UBXN11-208ENST00000421827 HSPB11Q9Y547 144 aa12.86□□□□□ -0.35
UBXN11-208ENST00000421827 PYYP10082 97 aa12.85□□□□□ -0.35
UBXN11-208ENST00000421827 DAD1P61803 113 aa12.85□□□□□ -0.35
UBXN11-208ENST00000421827 PDE6HQ13956 83 aa12.85□□□□□ -0.35
UBXN11-208ENST00000421827 NDUFAF3Q9BU61 184 aa12.85□□□□□ -0.35
UBXN11-208ENST00000421827 C17orf112F2Z3M2 114 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 NDUFB4O95168 129 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 AZU1P20160 251 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 RPL12P30050 165 aaKnown RBP12.84□□□□□ -0.35
UBXN11-208ENST00000421827 TAS2R60P59551 318 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
UBXN11-208ENST00000421827 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 ALG5Q9Y673 324 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 DNAH6Q9C0G6 4158 aa12.84□□□□□ -0.35
UBXN11-208ENST00000421827 LYRM9A8MSI8 78 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 NPIPB6E9PJ23 425 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 PTTG1O95997 202 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 BLNKQ8WV28 456 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 FAM210BQ96KR6 192 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
UBXN11-208ENST00000421827 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
UBXN11-208ENST00000421827 PRELID1Q9Y255 219 aa12.83□□□□□ -0.36
UBXN11-208ENST00000421827 H7BYZ3 331 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 M0R3E3 92 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 HTN1P15515 57 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 HTN3P15516 51 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 ODF3Q96PU9 254 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
UBXN11-208ENST00000421827 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 IFNA5P01569 189 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 LEPP41159 167 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 SCGB1C1Q8TD33 95 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 AAMDCQ9H7C9 122 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 FUT9Q9Y231 359 aa12.81□□□□□ -0.36
UBXN11-208ENST00000421827 NBEAP1P0C6P0 100 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 P0DMU3 169 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 ZNF493Q6ZR52 646 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 EXOC3-AS1Q8N2X6 119 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 PAXXQ9BUH6 204 aa12.8□□□□□ -0.36
UBXN11-208ENST00000421827 DNAH10Q8IVF4 4471 aa12.79□□□□□ -0.36
UBXN11-208ENST00000421827 J3KRW8 73 aa12.79□□□□□ -0.36
UBXN11-208ENST00000421827 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
UBXN11-208ENST00000421827 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
UBXN11-208ENST00000421827 FFAR4Q5NUL3 377 aa12.79□□□□□ -0.36
UBXN11-208ENST00000421827 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
UBXN11-208ENST00000421827 OR10J4P0C629 311 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 ERCC8Q13216 396 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 ICAM4Q14773 271 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 FCN2Q15485 313 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 RNASE8Q8TDE3 154 aaKnown RBP12.78□□□□□ -0.36
UBXN11-208ENST00000421827 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 FXYD5Q96DB9 178 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 MED28Q9H204 178 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 TIMM8BQ9Y5J9 83 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-208ENST00000421827 FRAS1Q86XX4 4008 aa12.78□□□□□ -0.36
UBXN11-208ENST00000421827 TRAV12-3A0A0B4J271 114 aa12.77□□□□□ -0.37
UBXN11-208ENST00000421827 OR7C2O60412 319 aa12.77□□□□□ -0.37
UBXN11-208ENST00000421827 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
UBXN11-208ENST00000421827 POM121L12Q8N7R1 296 aa12.77□□□□□ -0.37
UBXN11-208ENST00000421827 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
UBXN11-208ENST00000421827 FAM122CQ6P4D5 195 aa12.76□□□□□ -0.37
UBXN11-208ENST00000421827 TMEM88Q6PEY1 159 aa12.76□□□□□ -0.37
UBXN11-208ENST00000421827 PHYHIPLQ96FC7 376 aa12.76□□□□□ -0.37
UBXN11-208ENST00000421827 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
UBXN11-208ENST00000421827 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
UBXN11-208ENST00000421827 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
UBXN11-208ENST00000421827 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms