RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 KCNIP3Q9Y2W7 256 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 V9GYH0 126 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 DNAH2Q9P225 4427 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 TRAV30A0A087WSZ9 112 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 SMCO3A2RU48 225 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF98A6NK75 572 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 PLA2G10O15496 165 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 CRXO43186 299 aaPredicted RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 SFT2D2O95562 160 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 METTL15P1P0C7V9 234 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 NKX2-1P43699 371 aaPredicted RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 EIF2B2P49770 351 aaKnown RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 CMC4P56277 68 aaPredicted RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 SPINK13Q1W4C9 94 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 AARDQ4LEZ3 155 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 FAM222AQ5U5X8 452 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 OR8G2PQ6IF36 304 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 AMTNQ6UX39 209 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 Q75L30 129 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 BAP18Q8IXM2 172 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 OR8I2Q8N0Y5 310 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 Q8N377 158 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 TOMM5Q8N4H5 51 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 OR1B1Q8NGR6 318 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 RNASEH2CQ8TDP1 164 aaKnown RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 GATAD1Q8WUU5 269 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 AP3S1Q92572 193 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 IL22RA2Q969J5 263 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 PPP1R14BQ96C90 147 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 ATP6V0BQ99437 205 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 SAV1Q9H4B6 383 aaPredicted RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 NRN1Q9NPD7 142 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 PSENENQ9NZ42 101 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 CCDC59Q9P031 241 aaKnown RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 GSKIPQ9P0R6 139 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 YTHDF2Q9Y5A9 579 aaKnown RBP2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 RFNGQ9Y644 331 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 NACAE9PAV3 2078 aa2.41□□□□□ -2.02
SEMA3A-202ENST00000420047 TRAV6A0A075B6T7 132 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 TRAV10A0A0B4J240 114 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 A0A0B4J2A0 478 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 A0A0J9YX75 114 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 C9orf170A2RU37 121 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 FAM24AA6NFZ4 105 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SNRPGP15A8MWD9 76 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 CORTO00230 105 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SYNGR2O43760 224 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 ATG12O94817 140 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 OR5G3P0C626 314 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 DEFB130BP0DP73 79 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 DEFB130AP0DP74 79 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SLC25A4P12235 298 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 HLA-DRB4P13762 266 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 MIFP14174 115 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 TBPP20226 339 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 BTCP35070 178 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 GPX4P36969 197 aaPredicted RBP2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 CNN1P51911 297 aaKnown RBP2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 TMBIM6P55061 237 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 DLK1P80370 383 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 PSG9Q00887 426 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SLC38A11Q08AI6 406 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 GAGE2BQ13066 116 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 GAGE2EQ4V326 116 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 TMEM128Q5BJH2 165 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 GAGE2AQ6NT46 116 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 MORN3Q6PF18 240 aaPredicted RBP2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 CYP2G1PQ6ZSU1 146 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 ACOT7LQ6ZUV0 252 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 THAP8Q8NA92 274 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 BPIFCQ8NFQ6 507 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 OR11H7Q8NGC8 314 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 RAB2BQ8WUD1 216 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SLC35E1Q96K37 410 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 PRAC1Q96KF2 57 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 PRRT1Q99946 306 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 C7orf50Q9BRJ6 194 aaKnown RBP2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SEC22CQ9BRL7 303 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SRRQ9GZT4 340 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 MFFQ9GZY8 342 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 C11orf68Q9H3H3 251 aaKnown RBP2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 TMEM231Q9H6L2 316 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 GAGE2DQ9UEU5 116 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SHPKQ9UHJ6 478 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 SCP2D1Q9UJQ7 156 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 RABL2BQ9UNT1 228 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 RCL1Q9Y2P8 373 aaKnown RBP2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 U3KQ87 197 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 HLA-DRB4X5D2U9 266 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 DNAH17Q9UFH2 4485 aa2.4□□□□□ -2.03
SEMA3A-202ENST00000420047 TRAV2A0A0B4J234 112 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 A0A0J9YY99 117 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 PLAC8L1A1L4L8 177 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 H3BQ15 152 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 SLC17A3O00476 420 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 MRPS12O15235 138 aaKnown RBP2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 BCL2L11O43521 198 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 SSSCA1O60232 199 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 CST7O76096 145 aa2.39□□□□□ -2.03
SEMA3A-202ENST00000420047 SIX6O95475 246 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms