RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 IGHV3OR16-13A0A075B7E8 117 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 IGHV3-74A0A0B4J1X5 117 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 SCO2A0A1W2PP80 73 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 PEX7O00628 323 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 SLC25A5P05141 298 aaKnown RBP10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 WFDC9Q8NEX5 89 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 CMTM2Q8TAZ6 248 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 PARLQ9H300 379 aa10.74□□□□□ -0.69
SHMT1P1-201ENST00000419974 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 F8W036 122 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 EDN2P20800 178 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 CSN1S1P47710 185 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 INSL3P51460 131 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 PNRC1Q12796 327 aaPredicted RBP10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 TMEM183BQ1AE95 376 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 LINC00052Q96N35 136 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
SHMT1P1-201ENST00000419974 K7EQG2 157 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 K7EQM0 130 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 ID1P41134 155 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 PSG3Q16557 428 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 FMC1Q96HJ9 113 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 C16orf92Q96LL3 132 aa10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 SPAG8Q99932 426 aaPredicted RBP10.72□□□□□ -0.69
SHMT1P1-201ENST00000419974 ZNF727A8MUV8 499 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 H3BTX0 84 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 WIPF1O43516 503 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 IGLV1-51P01701 117 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 PF4P02776 101 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 RPL35P42766 123 aaKnown RBP10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 HIST2H2BDQ6DRA6 164 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 COX8CQ7Z4L0 72 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 SVBPQ8N300 66 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 NIPSNAP3BQ9BS92 247 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 NAT8Q9UHE5 227 aa10.71□□□□□ -0.69
SHMT1P1-201ENST00000419974 IGLV2-11P01706 119 aa10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 SNRPCP09234 159 aaKnown RBP10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 SNRPD3P62318 126 aaKnown RBP10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 TMEM241Q24JQ0 296 aa10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 SDF2L1Q9HCN8 221 aa10.7□□□□□ -0.7
SHMT1P1-201ENST00000419974 TRBV20OR9-2A0A075B6H5 130 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 TRBV7-9A0A0J9YWB2 115 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 B4DEV8 164 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 M0R3E3 92 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 LTAP01374 205 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 AKR1C3P42330 323 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 RPL11P62913 178 aaKnown RBP10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 RBPMS2Q6ZRY4 209 aaKnown RBP10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 C9orf47Q6ZRZ4 202 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 TMEM61Q8N0U2 210 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 IGF2BP2-AS1Q96M15 143 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 DERL1Q9BUN8 251 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 MCRIP2Q9BUT9 160 aaKnown RBP10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 ZFP30Q9Y2G7 519 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
SHMT1P1-201ENST00000419974 CMC4P56277 68 aaPredicted RBP10.68□□□□□ -0.7
SHMT1P1-201ENST00000419974 CD300EQ496F6 205 aaPredicted RBP10.68□□□□□ -0.7
SHMT1P1-201ENST00000419974 TVP23CQ96ET8 276 aa10.68□□□□□ -0.7
SHMT1P1-201ENST00000419974 OR4C46A6NHA9 309 aa10.67□□□□□ -0.7
SHMT1P1-201ENST00000419974 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
SHMT1P1-201ENST00000419974 SNAPINO95295 136 aa10.67□□□□□ -0.7
SHMT1P1-201ENST00000419974 GNG4P50150 75 aa10.67□□□□□ -0.7
SHMT1P1-201ENST00000419974 GNG5P63218 68 aa10.67□□□□□ -0.7
SHMT1P1-201ENST00000419974 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
SHMT1P1-201ENST00000419974 APOC3P02656 99 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 UBE2G1P62253 170 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 RHEBQ15382 184 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 SAPCD1Q5SSQ6 148 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 C9orf66Q5T8R8 295 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 GOLT1AQ6ZVE7 132 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 C20orf173Q96LM9 149 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 LINC00479Q96M42 142 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 BIN3Q9NQY0 253 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 TMEM242Q9NWH2 141 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 VWFP04275 2813 aa10.66□□□□□ -0.7
SHMT1P1-201ENST00000419974 MEGF8Q7Z7M0 2845 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 A0A087WWC5 75 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 A8MTW9 85 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 SAP30O75446 220 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 IGLV2-8P01709 118 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 CEBPGP53567 150 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 RPL23P62829 140 aaKnown RBP10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 FLI1Q01543 452 aaPredicted RBP10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 GUCA2BQ16661 112 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 BEAN1Q3B7T3 259 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 CENPWQ5EE01 88 aa10.65□□□□□ -0.7
SHMT1P1-201ENST00000419974 Q86TA4 180 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms