RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 ANAPC13Q9BS18 74 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 C11orf1Q9H5F2 150 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SPANXB1Q9NS25 103 aaPredicted RBP3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SPANXA1Q9NS26 97 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 CYSLTR1Q9Y271 337 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SVILO95425 2214 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 AKAP13Q12802 2813 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 DNHD1Q96M86 4753 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 IGHV3OR16-10A0A075B7F0 116 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 A0A1B0GWA3 101 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 H3BSH0 61 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 IFNA1P01562 189 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 ARFRP1Q13795 201 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SLC25A34Q6PIV7 304 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 ZNF493Q6ZR52 646 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SPATA12Q7Z6I5 190 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 OR5D14Q8NGL3 314 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SGMS2Q8NHU3 365 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 MRPL30Q8TCC3 161 aaKnown RBP3.74□□□□□ -1.81
VPS13A-207ENST00000419472 NAT8BQ9UHF3 227 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 LOC102725191A0A1B0GVB3 256 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 CEBPZOSA8MTT3 80 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 SPINK8P0C7L1 97 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
VPS13A-207ENST00000419472 GLIPR1L1Q6UWM5 242 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 OR8B3Q8NGG8 313 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 BORCS7Q96B45 105 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 OR8B2Q96RD0 313 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 MS4A6AQ9H2W1 248 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 MAP1LC3AQ9H492 121 aa3.74□□□□□ -1.81
VPS13A-207ENST00000419472 MCTS1Q9ULC4 181 aaKnown RBP3.74□□□□□ -1.81
VPS13A-207ENST00000419472 ITPR1Q14643 2758 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 IGHV5-10-1A0A0J9YXX1 117 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 hADV38S2A0JD32 116 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 SYNGR1O43759 233 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 FOXH1O75593 365 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 C8orf88P0DMB2 117 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 CRYBB3P26998 211 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 GRB2P62993 217 aaKnown RBP3.73□□□□□ -1.81
VPS13A-207ENST00000419472 GLYATL3Q5SZD4 288 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 MARCH3Q86UD3 253 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 ZNF676Q8N7Q3 588 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 OR51A4Q8NGJ6 313 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 OR5P3Q8WZ94 311 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 TMEM133Q9H2Q1 129 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 MED31Q9Y3C7 131 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 SPCS1Q9Y6A9 102 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 LINC00312Q9Y6C7 94 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 HCFC1P51610 2035 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 PCNX2A6NKB5 2137 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 NBASA2RRP1 2371 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 CD300LBA8K4G0 201 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 F8W1H4 67 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 H3BUT2 72 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 H7C1C5 153 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 SDCBPO00560 298 aaPredicted RBP3.73□□□□□ -1.81
VPS13A-207ENST00000419472 DEGS1O15121 323 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 CCL4P13236 92 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 NPY1RP25929 384 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 RPS27P42677 84 aaKnown RBP3.73□□□□□ -1.81
VPS13A-207ENST00000419472 TCL1AP56279 114 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 TTC32Q5I0X7 151 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 OR8B12Q8NGG6 310 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 OR10AC1Q8NH08 325 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 ZNF721Q8TF20 911 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 AMELYQ99218 206 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 GGTLC1Q9BX51 225 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 TP53TG1Q9Y2A0 90 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 ZNF835Q9Y2P0 537 aa3.73□□□□□ -1.81
VPS13A-207ENST00000419472 DNAJC13O75165 2243 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 CRYM-AS1A6NIL9 109 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 FABP5P3A8MUU1 101 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 ZNF737O75373 536 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 CLPSP04118 112 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 PRB1P04280 392 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 PRTN3P24158 256 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 PSG4Q00888 419 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 ATP5G2Q06055 141 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 LRRC75BQ2VPJ9 315 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 LYPD6Q86Y78 171 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 OR4C13Q8NGP0 309 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 OR10D3Q8NH80 312 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 TSKUQ8WUA8 353 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 METTL26Q96S19 204 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 NMNAT3Q96T66 252 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 PMCHL2Q9BQD1 86 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 SFXN3Q9BWM7 321 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 ZNF702PQ9H963 129 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 IGHV1-69DA0A0B4J2H0 117 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 SMIM9A6NGZ8 99 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 IGHV3-23P01764 117 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 CBLN1P23435 193 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 CA7P43166 264 aa3.72□□□□□ -1.81
VPS13A-207ENST00000419472 TMEM97Q5BJF2 176 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms