RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SHANK2-AS3Q9BTD1 123 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 SLC25A39Q9BZJ4 359 aaPredicted RBP5.02□□□□□ -1.61
HMGN1-205ENST00000419378 C11orf68Q9H3H3 251 aaKnown RBP5.02□□□□□ -1.61
HMGN1-205ENST00000419378 HIGD1AQ9Y241 93 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 HLA-DRB4X5D2U9 266 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 H3BMM0 161 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 SIX6O95475 246 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 OR5G3P0C626 314 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 SULT1A1P50225 295 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 VWC2Q2TAL6 325 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 PAPPA-AS1Q5QFB9 102 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 GDF5OSQ5U4N7 250 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 PATE2Q6UY27 113 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 FOXI2Q6ZQN5 318 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 STX12Q86Y82 276 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 TMEM252Q8N6L7 170 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 CSNK1G2-AS1Q8NCQ2 148 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 RSG1Q9BU20 258 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 ARL6Q9H0F7 186 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 SAV1Q9H4B6 383 aaPredicted RBP5.01□□□□□ -1.61
HMGN1-205ENST00000419378 UQCC1Q9NVA1 299 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 CLEC5AQ9NY25 188 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 WDR83OSQ9Y284 106 aa5.01□□□□□ -1.61
HMGN1-205ENST00000419378 UBE2L5PA0A1B0GUS4 154 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 F6UB75 175 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 DEFB4AO15263 64 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 IGKV3-20P01619 116 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 RPL7P18124 248 aaKnown RBP5□□□□□ -1.61
HMGN1-205ENST00000419378 S100A11P31949 105 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 CAMLGP49069 296 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 H2BFSP57053 126 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 NUTF2P61970 127 aaKnown RBP5□□□□□ -1.61
HMGN1-205ENST00000419378 HBG1P69891 147 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 HBG2P69892 147 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 S100A7AQ86SG5 101 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 Q8NAQ8 132 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 NMES1Q9C002 83 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 ARV1Q9H2C2 271 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 HRH4Q9H3N8 390 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 RPRMQ9NS64 109 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
HMGN1-205ENST00000419378 A0A087X0K7 114 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 TRAV8-2A0A0B4J237 113 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 A0A0J9YX75 114 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 NUPR2A6NF83 97 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 ZNF705EA8MWA4 302 aaPredicted RBP4.99□□□□□ -1.61
HMGN1-205ENST00000419378 E5RGE8 158 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 MRPS12O15235 138 aaKnown RBP4.99□□□□□ -1.61
HMGN1-205ENST00000419378 SSNA1O43805 119 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 COX7A2P2O60397 106 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 MIFP14174 115 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 FXYD7P58549 80 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 NANOS2P60321 138 aaKnown RBP4.99□□□□□ -1.61
HMGN1-205ENST00000419378 BAXQ07812 192 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 FGL1Q08830 312 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 LRRC37A5PQ49AS3 106 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 FAM78BQ5VT40 261 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 SPATA31B1PQ5VZV4 182 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 EBLN2Q6P2I7 272 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 WDR73Q6P4I2 378 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 LINC00305Q7Z4B0 112 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 RNF182Q8N6D2 247 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 ZNF709Q8N972 641 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 OR4B1Q8NGF8 309 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 C11orf45Q8TAV5 145 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 TMEM37Q8WXS4 190 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 C1QTNF4Q9BXJ3 329 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 OR5AC2Q9NZP5 309 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 XCL2Q9UBD3 114 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 RNF24Q9Y225 148 aa4.99□□□□□ -1.61
HMGN1-205ENST00000419378 RLN2P04090 185 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
HMGN1-205ENST00000419378 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 CXCL3P19876 107 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 FGF7P21781 194 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 HLA-DMBP28068 263 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 B2MP61769 119 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 CYCSP99999 105 aaKnown RBP4.98□□□□□ -1.61
HMGN1-205ENST00000419378 RAB31Q13636 194 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 OPCMLQ14982 345 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 RBMY1FQ15415 496 aaKnown RBP4.98□□□□□ -1.61
HMGN1-205ENST00000419378 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 C10orf113Q5VZT2 155 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 MIC13Q5XKP0 118 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 CEMP1Q6PRD7 247 aaPredicted RBP4.98□□□□□ -1.61
HMGN1-205ENST00000419378 ZNF705AQ6ZN79 300 aaPredicted RBP4.98□□□□□ -1.61
HMGN1-205ENST00000419378 Q6ZRG5 221 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 ZNF738Q8NE65 137 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 PPP1R1CQ8WVI7 109 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 PFDN5Q99471 154 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 NPCDR1Q9BY65 106 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 MFFQ9GZY8 342 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 SLC35B3Q9H1N7 401 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 PXMP4Q9Y6I8 212 aa4.98□□□□□ -1.61
HMGN1-205ENST00000419378 IGLV5-52A0A0A0MRZ9 124 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 A8MTW9 85 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 SLC17A3O00476 420 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms