RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DNAJC30Q96LL9 226 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 KNCNA6PVL3 124 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 AMBPP02760 352 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 IFITM2Q01629 132 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 GAGE12JA6NER3 117 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 IGHG3P01860 377 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 GAGE1Q13065 139 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 GAGE4Q13068 117 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 GAGE5Q13069 117 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 GAGE13Q4V321 117 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 FAM90A2PQ658T7 463 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
PTCH1-205ENST00000418258 PNRC2Q9NPJ4 139 aaKnown RBP9.09□□□□□ -0.95
PTCH1-205ENST00000418258 ZNRD1Q9P1U0 126 aa9.09□□□□□ -0.96
PTCH1-205ENST00000418258 RASL11AQ6T310 242 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 KLK9Q9UKQ9 250 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 IGHV2-70DA0A0C4DH43 119 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 MST1LQ2TV78 715 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 C17orf82Q86X59 251 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-205ENST00000418258 SPOCK3Q9BQ16 436 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 OBSL1O75147 1896 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 ZNF362Q5T0B9 420 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-205ENST00000418258 TRPT1Q86TN4 253 aaKnown RBP9.08□□□□□ -0.96
PTCH1-205ENST00000418258 TMEM158Q8WZ71 300 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 ZNF479Q96JC4 524 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 NTF4P34130 210 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE12BA1L429 117 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE7O76087 117 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GLRX5Q86SX6 157 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 CRIPAKQ8N1N5 446 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 PTPRQQ9UMZ3 2332 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 C5orf24Q7Z6I8 188 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 RMI2Q96E14 147 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 J3QLI3 93 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 B3GALT5-AS1P59052 145 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 HSD52Q0P140 79 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
PTCH1-205ENST00000418258 LY6G6FQ5SQ64 297 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 DKK4Q9UBT3 224 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 CLPSP04118 112 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 C2orf82Q6UX34 121 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 LY6G5BQ8NDX9 201 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 ZNF106Q9H2Y7 1883 aaKnown RBP9.06□□□□□ -0.96
PTCH1-205ENST00000418258 BTCP35070 178 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 GFI1Q99684 422 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 C22orf46C9J442 243 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 H0YIZ8 118 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 IGKV1-5P01602 117 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 VWC2Q2TAL6 325 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 RPRMLQ8N4K4 120 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 IGF2BP2-AS1Q96M15 143 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 PAX9P55771 341 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 ANXA2RQ3ZCQ2 193 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 A0A096LPF7 62 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 G3V318 75 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 ESDP10768 282 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 HGFACQ04756 655 aa9.06□□□□□ -0.96
PTCH1-205ENST00000418258 RBMY1FQ15415 496 aaKnown RBP9.06□□□□□ -0.96
PTCH1-205ENST00000418258 TRAV12-2A0A075B6T6 113 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 A0A1W2PPI3 338 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 C5orf63A6NC05 138 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 REG4Q9BYZ8 158 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 PFN2P35080 140 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 AMN1Q8IY45 258 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 FAM208BQ5VWN6 2430 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 MLANAQ16655 118 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 TNRC6AQ8NDV7 1962 aaKnown RBP9.05□□□□□ -0.96
PTCH1-205ENST00000418258 PMVKQ15126 192 aa9.05□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BKO60814 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BJP06899 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 RNASE2P10153 161 aaKnown RBP9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BOP23527 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 MPZP25189 248 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BBP33778 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BDP58876 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BCP62807 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 PDE6HQ13956 83 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 GUSBP1Q15486 140 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST2H2BEQ16778 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BHQ93079 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BNQ99877 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 HIST1H2BMQ99879 126 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 GSN-AS1Q9NRJ2 163 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 CFHR2P36980 270 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 GAGE6Q13070 117 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 CLPSL2Q6UWE3 100 aa9.04□□□□□ -0.96
PTCH1-205ENST00000418258 BCL6BQ8N143 479 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-205ENST00000418258 PCP4P48539 62 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms