RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 C4orf3Q8WVX3 66 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 LINC01619G3V211 115 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 K7EMT4 169 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 PF4P02776 101 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 MYCNOSP40205 109 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 GNG4P50150 75 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 SYNJ2BPP57105 145 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 DEFB136Q30KP8 78 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 TCTEX1D4Q5JR98 221 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 OR1N2Q8NGR9 330 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 RHPN1-AS1Q9BWJ2 59 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 SMAD5-AS1Q9Y6J3 95 aa10.01□□□□□ -0.81
HLA-DMB-258ENST00000418107 TRAV34A0A0B4J273 112 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 B4DEV8 164 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 K7EQM0 130 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 SLC17A3O00476 420 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 MEOX2P50222 304 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 RPL23P62829 140 aaKnown RBP10□□□□□ -0.81
HLA-DMB-258ENST00000418107 OR11H1Q8NG94 326 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 C2CD4CQ8TF44 421 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 WWC2-AS2Q96NR7 200 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 ATG101Q9BSB4 218 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 SMPXQ9UHP9 88 aa10□□□□□ -0.81
HLA-DMB-258ENST00000418107 A0A087X0K7 114 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 MT-ND4LP03901 98 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 S100A9P06702 114 aaKnown RBP9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 SLURP1P55000 103 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 TAS2R60P59551 318 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 CENPWQ5EE01 88 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 TMEM88Q6PEY1 159 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 GOLT1AQ6ZVE7 132 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 GLMPQ8WWB7 406 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 SMCO4Q9NRQ5 59 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 PRELID1Q9Y255 219 aa9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 DYNC2H1Q8NCM8 4307 aaKnown RBP9.99□□□□□ -0.81
HLA-DMB-258ENST00000418107 C9JCJ5 164 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 LGALS9O00182 355 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 CHEK1O14757 476 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 ZNF253O75346 499 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 TCRAP04437 139 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 C8orf86Q6ZUL3 223 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 OCC1Q8TAD7 63 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 FMC1Q96HJ9 113 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 C16orf92Q96LL3 132 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 LINC00479Q96M42 142 aa9.98□□□□□ -0.81
HLA-DMB-258ENST00000418107 IGKV3-7A0A075B6H7 116 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 PGPEP1LA6NFU8 196 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 MGST1P10620 155 aaKnown RBP9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 IGFL4Q6B9Z1 124 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 TCF24Q7RTU0 167 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 BAGE2Q86Y30 109 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 CBLN2Q8IUK8 224 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 DUX3Q96PT4 197 aa9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 ZNF331Q9NQX6 463 aaPredicted RBP9.97□□□□□ -0.81
HLA-DMB-258ENST00000418107 A0A087WWC5 75 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 M0R3E3 92 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 ISLRO14498 428 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 EGFEM1PQ0D2K5 195 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 KLF5Q13887 457 aaPredicted RBP9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 TMEM183BQ1AE95 376 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 RNF212Q495C1 297 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 B9D2Q9BPU9 175 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 PEMTQ9UBM1 199 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 SELENOKQ9Y6D0 94 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 LY96Q9Y6Y9 160 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 RYR2Q92736 4967 aa9.96□□□□□ -0.82
HLA-DMB-258ENST00000418107 TMEM213A2RRL7 107 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 A8MWP6 167 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 DIRC3C9JPN6 131 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 TSPAN4O14817 238 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 PRNTQ86SH4 94 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 CTDSP1Q9GZU7 261 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 CLEC5AQ9NY25 188 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 SACSQ9NZJ4 4579 aa9.95□□□□□ -0.82
HLA-DMB-258ENST00000418107 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 SERTM2A0A1B0GWG4 89 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 C2orf70A6NJV1 201 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 H7BYZ3 331 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 CCL24O00175 119 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 EDN2P20800 178 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 ID1P41134 155 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 LCN12Q6JVE5 192 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 WFDC3Q8IUB2 231 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 GBGT1Q8N5D6 347 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 RNF182Q8N6D2 247 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
HLA-DMB-258ENST00000418107 ISOC2Q96AB3 205 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms