RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SLC25A5P05141 298 aaKnown RBP5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 CT45A10P0DMU9 189 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 EVI2AP22794 236 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 MRPL23Q16540 153 aaKnown RBP5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 LYPD5Q6UWN5 251 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 PATE2Q6UY27 113 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 LINC00305Q7Z4B0 112 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 TMEM70Q9BUB7 260 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 NAA50Q9GZZ1 169 aaKnown RBP5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 NPVFQ9HCQ7 196 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 MSRB1Q9NZV6 116 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 RSL24D1Q9UHA3 163 aaKnown RBP5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 PRO0255Q9UI72 69 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 PXMP4Q9Y6I8 212 aa5.34□□□□□ -1.55
HLA-DPA1-241ENST00000417724 FAT1Q14517 4588 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 NPIPB6E9PJ23 425 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 FNDC10F2Z333 226 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 HOXB5P09067 269 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SNRPCP09234 159 aaKnown RBP5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 FAUP35544 74 aaKnown RBP5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ID3Q02535 119 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ANXA2RQ3ZCQ2 193 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TEPPQ6URK8 271 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 EIF4E3Q8N5X7 224 aaKnown RBP5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C11orf72Q8NBR9 251 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ST6GAL2Q96JF0 529 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 LINC00467Q9BRT7 94 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PSENENQ9NZ42 101 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 HHLA3Q9XRX5 114 aa5.33□□□□□ -1.56
HLA-DPA1-241ENST00000417724 IGLV5-52A0A0A0MRZ9 124 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 LINC00854A0A1B0GVQ3 168 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C7orf71A4D174 169 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 H3BTX0 84 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SLC17A3O00476 420 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SPINK4O60575 86 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PRAF2O60831 178 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SFT2D2O95562 160 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 CRYBA4P53673 196 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 RRAS2P62070 204 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 POLR2GP62487 172 aaKnown RBP eCLIP5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 GUK1Q16774 197 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 ZNF546Q86UE3 836 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 OR10P1Q8NGE3 313 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 NTN5Q8WTR8 489 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SAT2Q96F10 170 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SMIM8Q96KF7 97 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SLC25A21Q9BQT8 299 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 CCDC59Q9P031 241 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MGAT4CQ9UBM8 478 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 KLF12Q9Y4X4 402 aa5.32□□□□□ -1.56
HLA-DPA1-241ENST00000417724 FABP12A6NFH5 140 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 H3BQ15 152 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PSCAO43653 123 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 COX7A2P2O60397 106 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MPDU1O75352 247 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 IGHV3-53P01767 116 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PLA2G1BP04054 148 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 IGLC2P0DOY2 106 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 RNASE4P34096 147 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TCL1AP56279 114 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 AP3S2P59780 193 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 HAMPP81172 84 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SLC38A11Q08AI6 406 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 PPP1R1AQ13522 171 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C10orf113Q5VZT2 155 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C10orf126Q8N4M7 172 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 LINC00477Q96M19 166 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 C8orf49Q96NF6 230 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MRPL32Q9BYC8 188 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 DNAJC4Q9NNZ3 241 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MYCBP2O75592 4640 aa5.31□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TRGV4A0A0C4DH28 118 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 KLLNB2CW77 178 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 RGS13O14921 159 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 AGPAT2O15120 278 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SSSCA1O60232 199 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 GPX1P07203 203 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 CRYGDP07320 174 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 NMBP08949 121 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SRIP30626 198 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 CD300CQ08708 224 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 RAB31Q13636 194 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 FHL2Q14192 279 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 OPCMLQ14982 345 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SPCS2Q15005 226 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 IBA57Q5T440 356 aaKnown RBP5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TMEM14EPQ6UXP3 125 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 Q6ZRG5 221 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 WFDC10BQ8IUB3 73 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TOMM5Q8N4H5 51 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 SYT8Q8NBV8 401 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 MCFD2Q8NI22 146 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 TMEM37Q8WXS4 190 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 VGLL1Q99990 258 aa5.3□□□□□ -1.56
HLA-DPA1-241ENST00000417724 E5RGE8 158 aa5.29□□□□□ -1.56
HLA-DPA1-241ENST00000417724 K7EQD1 137 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms