RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 A0A1W2PPV4 95 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 A8MTW9 85 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 ZNF705FA8MVS1 300 aaPredicted RBP9.1□□□□□ -0.95
SKA1-203ENST00000417656 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
SKA1-203ENST00000417656 BCL2L11O43521 198 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 JTBO76095 146 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 DUSP14O95147 198 aaKnown RBP9.1□□□□□ -0.95
SKA1-203ENST00000417656 PDE6HQ13956 83 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 TMEM41BQ5BJD5 291 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 OR8A1Q8NGG7 326 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 CLUHP3Q96NS8 147 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 EDA2RQ9HAV5 297 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 XCL2Q9UBD3 114 aa9.1□□□□□ -0.95
SKA1-203ENST00000417656 A0A0D9SG52 128 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 KANTRA0A1W2PQU2 76 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 PRAC2D3DTV9 90 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 M0R3E3 92 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 NUTF2P61970 127 aaKnown RBP9.09□□□□□ -0.95
SKA1-203ENST00000417656 SERF2P84101 59 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 PSG9Q00887 426 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 AMTNQ6UX39 209 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 EXOC3-AS1Q8N2X6 119 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 RPP25LQ8N5L8 163 aaKnown RBP9.09□□□□□ -0.95
SKA1-203ENST00000417656 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
SKA1-203ENST00000417656 PFDN1O60925 122 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 MBP02144 154 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 C1QBP02746 253 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 ARL14EPLP0DKL9 152 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 CD300CQ08708 224 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 ICAM4Q14773 271 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 ZNF471Q9BX82 626 aaPredicted RBP9.08□□□□□ -0.96
SKA1-203ENST00000417656 C1QTNF4Q9BXJ3 329 aa9.08□□□□□ -0.96
SKA1-203ENST00000417656 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 BOLA2-SMG1P6H3BVE0 249 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 M0R2Z0 102 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 PQLC2Q6ZP29 291 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 TMUB2Q71RG4 321 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
SKA1-203ENST00000417656 RARRES2Q99969 163 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 AAMDCQ9H7C9 122 aa9.07□□□□□ -0.96
SKA1-203ENST00000417656 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 AKR1C8PQ5T2L2 129 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 BAP18Q8IXM2 172 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 OR10J6PQ8NGY7 276 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 ACTR3CQ9C0K3 210 aaPredicted RBP9.06□□□□□ -0.96
SKA1-203ENST00000417656 Q9H3A6 140 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 PRELID1Q9Y255 219 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 X6R8D5 127 aa9.06□□□□□ -0.96
SKA1-203ENST00000417656 IGHV3OR16-12A0A075B7B8 117 aa9.05□□□□□ -0.96
SKA1-203ENST00000417656 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
SKA1-203ENST00000417656 ZNF705EA8MWA4 302 aaPredicted RBP9.05□□□□□ -0.96
SKA1-203ENST00000417656 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
SKA1-203ENST00000417656 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
SKA1-203ENST00000417656 GCHFRP30047 84 aa9.05□□□□□ -0.96
SKA1-203ENST00000417656 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
SKA1-203ENST00000417656 LGALSLQ3ZCW2 172 aaPredicted RBP9.05□□□□□ -0.96
SKA1-203ENST00000417656 PPP1R14DQ9NXH3 145 aa9.05□□□□□ -0.96
SKA1-203ENST00000417656 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 DEFB4AO15263 64 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
SKA1-203ENST00000417656 INSP01308 110 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 AMBPP02760 352 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 ERCC8Q13216 396 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 ZNF705AQ6ZN79 300 aaPredicted RBP9.04□□□□□ -0.96
SKA1-203ENST00000417656 IQCF2Q8IXL9 164 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 Q8NAQ8 132 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 MUC7Q8TAX7 377 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 HYLS1Q96M11 299 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
SKA1-203ENST00000417656 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
SKA1-203ENST00000417656 CXorf1O96002 111 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
SKA1-203ENST00000417656 RBMY1CP0DJD4 496 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 TPT1P13693 172 aaKnown RBP9.03□□□□□ -0.96
SKA1-203ENST00000417656 EIF5AP63241 154 aaKnown RBP9.03□□□□□ -0.96
SKA1-203ENST00000417656 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
SKA1-203ENST00000417656 ZFP69Q49AA0 526 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 LYPD1Q8N2G4 141 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 TMED6Q8WW62 240 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 GOLT1BQ9Y3E0 138 aa9.03□□□□□ -0.96
SKA1-203ENST00000417656 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 J3KRW8 73 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 SEC11BP0C7V7 166 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 CT45A10P0DMU9 189 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 MIFP14174 115 aa9.02□□□□□ -0.97
SKA1-203ENST00000417656 CDKN1BP46527 198 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms