RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
LINC00339-202ENST00000416769 SULT1A2P50226 295 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 RAB5CP51148 216 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 MORN5Q5VZ52 161 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 FAM122CQ6P4D5 195 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 DPPA3Q6W0C5 159 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
LINC00339-202ENST00000416769 BPIFA4PQ86YQ2 179 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 SLC25A22Q9H936 323 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 HSPG2P98160 4391 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 CDC34P49427 236 aaPredicted RBP9.29□□□□□ -0.92
LINC00339-202ENST00000416769 TAS2R45P59539 299 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
LINC00339-202ENST00000416769 SPATA31B1PQ5VZV4 182 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 MIR17HGQ75NE6 70 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 STXBP6Q8NFX7 210 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 RAB24Q969Q5 203 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 TMEM14CQ9P0S9 112 aa9.29□□□□□ -0.92
LINC00339-202ENST00000416769 CTXND1A0A1B0GTU2 59 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 DNASE2O00115 360 aaPredicted RBP9.28□□□□□ -0.92
LINC00339-202ENST00000416769 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
LINC00339-202ENST00000416769 ZNF688P0C7X2 276 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 GALR1P47211 349 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 PAFAH1B2P68402 229 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 OR51M1Q9H341 326 aa9.28□□□□□ -0.92
LINC00339-202ENST00000416769 TRAV10A0A0B4J240 114 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 PRSS29PA6NIE9 313 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 K7EQG2 157 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 TCTAP57738 103 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF726P1Q15940 193 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 KHDC3LQ587J8 217 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 TEX261Q6UWH6 196 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 ALKAL2Q6UX46 152 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 PQLC2Q6ZP29 291 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 STHQ8IWL8 128 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 RNF141Q8WVD5 230 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 MBD3L1Q8WWY6 194 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 HRH4Q9H3N8 390 aa9.27□□□□□ -0.93
LINC00339-202ENST00000416769 A0A087X0K7 114 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 TRAV2A0A0B4J234 112 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-202ENST00000416769 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 HIST1H1EP10412 219 aaKnown RBP9.26□□□□□ -0.93
LINC00339-202ENST00000416769 MEOX2P50222 304 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-202ENST00000416769 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF503Q96F45 646 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 PAXXQ9BUH6 204 aa9.26□□□□□ -0.93
LINC00339-202ENST00000416769 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 CXorf1O96002 111 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 IFNA7P01567 189 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 H2AFB1P0C5Y9 115 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 FHITP49789 147 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 DEFB1P60022 68 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 GUK1Q16774 197 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF680Q8NEM1 530 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 FAM213BQ8TBF2 198 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 LRRC20Q8TCA0 184 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 DCANP1Q8TF63 244 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 NRN1Q9NPD7 142 aa9.25□□□□□ -0.93
LINC00339-202ENST00000416769 DEFB131BA0A096LNP1 70 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 H3BQ15 152 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 HMGB3O15347 200 aaKnown RBP9.24□□□□□ -0.93
LINC00339-202ENST00000416769 OR7C2O60412 319 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINC00339-202ENST00000416769 NBEAP1P0C6P0 100 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 PYYP10082 97 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 MIFP14174 115 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 BLOC1S1P78537 153 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 FAM74A1Q5RGS3 127 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 SAMD13Q5VXD3 122 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 SUN5Q8TC36 379 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 SAT2Q96F10 170 aaPredicted RBP9.24□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF586Q9NXT0 402 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 NACAE9PAV3 2078 aa9.24□□□□□ -0.93
LINC00339-202ENST00000416769 TRBV19A0A075B6N1 114 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 TRAV1-1A0A0B4J248 108 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 MAP1LC3B2A6NCE7 125 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 ZNF253O75346 499 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 AMBPP02760 352 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 ARL14EPLP0DKL9 152 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 GCHFRP30047 84 aa9.23□□□□□ -0.93
LINC00339-202ENST00000416769 PDE6HQ13956 83 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms