RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 B4DSR2 109 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 PSPHP1O15172 72 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 IFNA1P01562 189 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 AKAIN1P0CW23 69 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TRAPPC2P0DI81 140 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TRAPPC2BP0DI82 140 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 RBP2P50120 134 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 QRFPP83859 136 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 OR8B8Q15620 311 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TMEM97Q5BJF2 176 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 FAM162BQ5T6X4 162 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 Q6ZRU5 148 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 CAMK2N1Q7Z7J9 78 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TRAPPC6BQ86SZ2 158 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 LYPD6Q86Y78 171 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 OR10K1Q8NGX5 313 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 OR8S1Q8NH09 359 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 CMBLQ96DG6 245 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 RNASE7Q9H1E1 156 aaKnown RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 TNFRSF19Q9NS68 423 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 DNAH17Q9UFH2 4485 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 AGRNO00468 2067 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 HYDINQ4G0P3 5121 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 DYNC1H1Q14204 4646 aaKnown RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 IGSF23A1L1A6 192 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 C9orf170A2RU37 121 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 ZNF736B4DX44 427 aaPredicted RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 H0YJW9 148 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 ZNF688P0C7X2 276 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 BLVRBP30043 206 aaPredicted RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 MP68P56378 58 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 DEFB116Q30KQ4 102 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 FAAP20Q6NZ36 180 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 ZFP2Q6ZN57 461 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 NIT1Q86X76 327 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 EXOC3-AS1Q8N2X6 119 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TMEM229BQ8NBD8 167 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 AQP3Q92482 292 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 GINS4Q9BRT9 223 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 LPAR5Q9H1C0 372 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 MED28Q9H204 178 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 PARP11Q9NR21 331 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 SCP2D1Q9UJQ7 156 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 LSM5Q9Y4Y9 91 aaKnown RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 CD300LBA8K4G0 201 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 EEF1E1-BLOC1S5C9J1V9 151 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SOCS1O15524 211 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 CD3DP04234 171 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 CSN2P05814 226 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 LINC00614P0C842 121 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 HIST1H1DP16402 221 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 ZNF83P51522 516 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 RRAS2P62070 204 aaPredicted RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 BSPH1Q075Z2 132 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 CDK10Q15131 360 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SCGB2B2Q4G0G5 96 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 RNASE10Q5GAN6 216 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR4C16Q8NGL9 310 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR5H2Q8NGV7 314 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 C1QTNF6Q9BXI9 259 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 NOS1APO75052 506 aaPredicted RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 NDUFB6O95139 128 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 ZNF14P17017 642 aaPredicted RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 LYPD2Q6UXB3 125 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 IDO2Q6ZQW0 420 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SLC25A26Q70HW3 274 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 ADM2Q7Z4H4 148 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 DAZ4Q86SG3 579 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 MKXQ8IYA7 352 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 LINC00612Q8N6U2 182 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR4S1Q8NGB4 309 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR5A2Q8NGI9 324 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 MUCL1Q96DR8 90 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 MRPS24Q96EL2 167 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 ARHGAP5-AS1Q96IT6 56 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SLC35E1Q96K37 410 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 CMSS1Q9BQ75 279 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 SLC25A21Q9BQT8 299 aaPredicted RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 HES4Q9HCC6 221 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 DAZ1Q9NQZ3 744 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 NOP16Q9Y3C1 178 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 YTHDF2Q9Y5A9 579 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 MPC1Q9Y5U8 109 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SONP18583 2426 aaKnown RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 KMT2AQ03164 3969 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 ABCA1O95477 2261 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 IGLV11-55A0A075B6I3 123 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 IGHV3-49A0A0A0MS15 119 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 WI2-2373I1.2A0A1W2PRP0 233 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 PQLC2LA1A4F0 135 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 CLPSL1A2RUU4 121 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 C7orf66A4D0T2 115 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 TRAPPC2LH3BP13 241 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 CREBL2O60519 120 aaPredicted RBP1.72□□□□□ -2.13
MCF2-204ENST00000414978 LYZP61626 148 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 HERVK_113P63121 156 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 GNG3P63215 75 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 TAF9Q16594 264 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR2T2Q6IF00 324 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 TMED4Q7Z7H5 227 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms