RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RNF151Q2KHN1 245 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 RPEL1Q2QD12 228 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 THAP8Q8NA92 274 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 OCC1Q8TAD7 63 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 ZNF502Q8TBZ5 544 aa12.01□□□□□ -0.49
SHMT2-202ENST00000414700 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
SHMT2-202ENST00000414700 FAM223BA6NKX1 122 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 BRI3O95415 125 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 IGKV1-17P01599 117 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 HINT1P49773 126 aaPredicted RBP12□□□□□ -0.49
SHMT2-202ENST00000414700 MFAP4P55083 255 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 SLC35B1P78383 322 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 ATP5G2Q06055 141 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 Q56UQ5 140 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 TCTEX1D4Q5JR98 221 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 WDR73Q6P4I2 378 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 FAM223AQ8IWN6 122 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 C16orf95Q9H693 158 aa12□□□□□ -0.49
SHMT2-202ENST00000414700 TRAV34A0A0B4J273 112 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 SCO2A0A1W2PP80 73 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 MPDU1O75352 247 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 TRBV12-3P01733 135 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 CLEC3BP05452 202 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 GPR183P32249 361 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
SHMT2-202ENST00000414700 RPL19P84098 196 aaKnown RBP11.99□□□□□ -0.49
SHMT2-202ENST00000414700 TIGITQ495A1 244 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 GCSAMLQ5JQS6 135 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 CLEC19AQ6UXS0 136 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 CHRDL1Q9BU40 450 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 TRAV30A0A087WSZ9 112 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 IGHV3-35A0A0C4DH35 117 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 A0A1W2PPV4 95 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 A0A1W2PS18 150 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 GNG7O60262 68 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 CTSGP08311 255 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 C3orf79P0CE67 100 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 PMCHP20382 165 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 COX19Q49B96 90 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 C11orf44Q8N8P7 122 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 WIPF2Q8TF74 440 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-202ENST00000414700 LY96Q9Y6Y9 160 aa11.99□□□□□ -0.49
SHMT2-202ENST00000414700 TCRBV4S1A1TA0A5B7 111 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 HAX1O00165 279 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 SLC17A3O00476 420 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 ZNF324O75467 553 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-202ENST00000414700 FOXE3Q13461 319 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 Q6ZVH6 145 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 K7EN84 100 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 NDUFA7O95182 113 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 LINC00869P0C866 280 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 PRR20EP86478 221 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 PRR20CP86479 221 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 PRR20DP86480 221 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 PRR20BP86481 221 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 PRR20AP86496 221 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 PMCHL1Q16048 86 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 ZNF414Q96IQ9 312 aa11.98□□□□□ -0.49
SHMT2-202ENST00000414700 C9JCJ5 164 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 ELANEP08246 267 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 NIT1Q86X76 327 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 MYOZ3Q8TDC0 251 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 UHRF2Q96PU4 802 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 TRGV9Q99603 122 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 NAT8BQ9UHF3 227 aa11.97□□□□□ -0.49
SHMT2-202ENST00000414700 TRBV7-1A0A0A6YYK4 115 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 CXorf1O96002 111 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 ARL14EPLP0DKL9 152 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 PSG1P11464 419 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 FCGR2BP31994 310 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-202ENST00000414700 RHOBP62745 196 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 RAB31Q13636 194 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 C18orf65Q6ZTR6 163 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 ZNF491Q8N8L2 437 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 RNF152Q8N8N0 203 aa11.96□□□□□ -0.49
SHMT2-202ENST00000414700 TMEM89A2RUT3 159 aa11.96□□□□□ -0.5
SHMT2-202ENST00000414700 FRMD6-AS1P0C7T7 363 aa11.96□□□□□ -0.5
SHMT2-202ENST00000414700 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.96□□□□□ -0.5
SHMT2-202ENST00000414700 OR4X2Q8NGF9 303 aa11.96□□□□□ -0.5
SHMT2-202ENST00000414700 C11orf52Q96A22 123 aa11.96□□□□□ -0.5
SHMT2-202ENST00000414700 RCHY1Q96PM5 261 aa11.96□□□□□ -0.5
SHMT2-202ENST00000414700 WNK1Q9H4A3 2382 aa11.96□□□□□ -0.5
SHMT2-202ENST00000414700 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 A0A0G2JLM5 398 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 STAG3L2P0CL84 134 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 STAG3L3P0CL85 134 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 PROK1P58294 105 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 BORCS7Q96B45 105 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 MRPL27Q9P0M9 148 aaKnown RBP11.95□□□□□ -0.5
SHMT2-202ENST00000414700 V9GYV3 84 aa11.95□□□□□ -0.5
SHMT2-202ENST00000414700 CBY3A6NI87 242 aa11.94□□□□□ -0.5
SHMT2-202ENST00000414700 CD28P10747 220 aa11.94□□□□□ -0.5
SHMT2-202ENST00000414700 NUDT10Q8NFP7 164 aa11.94□□□□□ -0.5
SHMT2-202ENST00000414700 VPS25Q9BRG1 176 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms