RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TMEM256Q8N2U0 113 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 SAT2Q96F10 170 aaPredicted RBP8.04□□□□□ -1.12
RFFL-204ENST00000414419 LINC01587Q99440 93 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 NIPSNAP3BQ9BS92 247 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 SMIM3Q9BZL3 60 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 MED28Q9H204 178 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 ZNF586Q9NXT0 402 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 TMEM14CQ9P0S9 112 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 TRBV19A0A075B6N1 114 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 ZNF705GA8MUZ8 300 aaPredicted RBP8.03□□□□□ -1.12
RFFL-204ENST00000414419 CRXO43186 299 aaPredicted RBP8.03□□□□□ -1.12
RFFL-204ENST00000414419 ZNF253O75346 499 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 HTN1P15515 57 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 PDE6HQ13956 83 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 RPP25LQ8N5L8 163 aaKnown RBP8.03□□□□□ -1.12
RFFL-204ENST00000414419 BLNKQ8WV28 456 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 MRPL32Q9BYC8 188 aaKnown RBP8.03□□□□□ -1.12
RFFL-204ENST00000414419 AAMDCQ9H7C9 122 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 DKK2Q9UBU2 259 aa8.03□□□□□ -1.12
RFFL-204ENST00000414419 YTHDF2Q9Y5A9 579 aaKnown RBP8.03□□□□□ -1.12
RFFL-204ENST00000414419 IGHV4-4A0A075B6R2 117 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 PRAC2D3DTV9 90 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 PYYP10082 97 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 DAD1P61803 113 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 FFAR4Q5NUL3 377 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 MIR17HGQ75NE6 70 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 MRPL53Q96EL3 112 aaKnown RBP8.02□□□□□ -1.13
RFFL-204ENST00000414419 SLC25A2Q9BXI2 301 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 OR51M1Q9H341 326 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 FUT9Q9Y231 359 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 PRELID1Q9Y255 219 aa8.02□□□□□ -1.13
RFFL-204ENST00000414419 OR7C2O60412 319 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 NBEAP1P0C6P0 100 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 LEPP41159 167 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 TAS2R60P59551 318 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 OXA1LQ15070 435 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 C20orf144Q9BQM9 153 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 NDUFAF3Q9BU61 184 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 PAXXQ9BUH6 204 aa8.01□□□□□ -1.13
RFFL-204ENST00000414419 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
RFFL-204ENST00000414419 LYRM9A8MSI8 78 aa8□□□□□ -1.13
RFFL-204ENST00000414419 H7BYZ3 331 aa8□□□□□ -1.13
RFFL-204ENST00000414419 J3KRW8 73 aa8□□□□□ -1.13
RFFL-204ENST00000414419 PRM2P04554 102 aa8□□□□□ -1.13
RFFL-204ENST00000414419 OR10J4P0C629 311 aa8□□□□□ -1.13
RFFL-204ENST00000414419 HTN3P15516 51 aa8□□□□□ -1.13
RFFL-204ENST00000414419 TAS2R45P59539 299 aa8□□□□□ -1.13
RFFL-204ENST00000414419 FCN2Q15485 313 aa8□□□□□ -1.13
RFFL-204ENST00000414419 CCDC28AQ8IWP9 274 aa8□□□□□ -1.13
RFFL-204ENST00000414419 C16orf74Q96GX8 76 aa8□□□□□ -1.13
RFFL-204ENST00000414419 PARD6GQ9BYG4 376 aaPredicted RBP8□□□□□ -1.13
RFFL-204ENST00000414419 PLA2G2EQ9NZK7 142 aa8□□□□□ -1.13
RFFL-204ENST00000414419 PLECQ15149 4684 aaKnown RBP8□□□□□ -1.13
RFFL-204ENST00000414419 A0A1W2PPV4 95 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 NPIPB6E9PJ23 425 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 M0R3E3 92 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 NDUFB4O95168 129 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 ICAM4Q14773 271 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 RGS21Q2M5E4 152 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 KHDC3LQ587J8 217 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 FAM122CQ6P4D5 195 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 EXOC3-AS1Q8N2X6 119 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 RNF141Q8WVD5 230 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 ASB13Q8WXK3 278 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 FAM167A-AS1Q96KT0 104 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 LINC00477Q96M19 166 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 ODF3Q96PU9 254 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 RYR2Q92736 4967 aa7.99□□□□□ -1.13
RFFL-204ENST00000414419 DNAH1Q9P2D7 4330 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 DEFB130BP0DP73 79 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 DEFB130AP0DP74 79 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 AZU1P20160 251 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 CSN1S1P47710 185 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 UBE2L3P68036 154 aaKnown RBP7.98□□□□□ -1.13
RFFL-204ENST00000414419 ERCC8Q13216 396 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 ZNF266Q14584 549 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 ACOT6Q3I5F7 207 aaPredicted RBP7.98□□□□□ -1.13
RFFL-204ENST00000414419 TMEM78Q5T7P6 136 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 GFI1BQ5VTD9 330 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 ZNF493Q6ZR52 646 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 FXYD5Q96DB9 178 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 FAM210BQ96KR6 192 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 WFDC1Q9HC57 220 aa7.98□□□□□ -1.13
RFFL-204ENST00000414419 TIMM8BQ9Y5J9 83 aaPredicted RBP7.98□□□□□ -1.13
RFFL-204ENST00000414419 TRAV12-3A0A0B4J271 114 aa7.97□□□□□ -1.13
RFFL-204ENST00000414419 SLC25A5P05141 298 aaKnown RBP7.97□□□□□ -1.13
RFFL-204ENST00000414419 GIPP09681 153 aaPredicted RBP7.97□□□□□ -1.13
RFFL-204ENST00000414419 P0DMU3 169 aa7.97□□□□□ -1.13
RFFL-204ENST00000414419 FAM231AP0DMU4 169 aa7.97□□□□□ -1.13
RFFL-204ENST00000414419 FAM231CP0DMU5 169 aa7.97□□□□□ -1.13
RFFL-204ENST00000414419 M6PRP20645 277 aa7.97□□□□□ -1.13
RFFL-204ENST00000414419 RANP62826 216 aaKnown RBP7.97□□□□□ -1.13
RFFL-204ENST00000414419 INO80EQ8NBZ0 244 aaPredicted RBP7.97□□□□□ -1.13
RFFL-204ENST00000414419 TMEM263Q8WUH6 116 aaKnown RBP7.97□□□□□ -1.13
RFFL-204ENST00000414419 GPX1P07203 203 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 FAM74A1Q5RGS3 127 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms