RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CEBPGP53567 150 aa12.71□□□□□ -0.38
SCAMP4-204ENST00000414057 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.38
SCAMP4-204ENST00000414057 UNQ9165/PRO28630Q6UXU0 137 aa12.71□□□□□ -0.38
SCAMP4-204ENST00000414057 SPATA25Q9BR10 227 aa12.71□□□□□ -0.38
SCAMP4-204ENST00000414057 OTORQ9NRC9 128 aa12.71□□□□□ -0.38
SCAMP4-204ENST00000414057 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.38
SCAMP4-204ENST00000414057 ZNF320A2RRD8 509 aa12.7□□□□□ -0.38
SCAMP4-204ENST00000414057 H3BQ15 152 aa12.7□□□□□ -0.38
SCAMP4-204ENST00000414057 PSG9Q00887 426 aa12.7□□□□□ -0.38
SCAMP4-204ENST00000414057 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
SCAMP4-204ENST00000414057 HIST1H2BAQ96A08 127 aa12.7□□□□□ -0.38
SCAMP4-204ENST00000414057 TENM3Q9P273 2699 aa12.7□□□□□ -0.38
SCAMP4-204ENST00000414057 ZNF727A8MUV8 499 aa12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 RANP62826 216 aaKnown RBP12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 PNRC1Q12796 327 aaPredicted RBP12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 CD300EQ496F6 205 aaPredicted RBP12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 ARL6IP6Q8N6S5 226 aa12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 C5orf17Q8NAS9 161 aa12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 SMIM7Q9BQ49 75 aa12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 PARLQ9H300 379 aa12.69□□□□□ -0.38
SCAMP4-204ENST00000414057 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
SCAMP4-204ENST00000414057 IZUMO1RA6ND01 250 aa12.68□□□□□ -0.38
SCAMP4-204ENST00000414057 C2orf70A6NJV1 201 aa12.68□□□□□ -0.38
SCAMP4-204ENST00000414057 FOLR2P14207 255 aa12.68□□□□□ -0.38
SCAMP4-204ENST00000414057 DEFB114Q30KQ6 69 aa12.68□□□□□ -0.38
SCAMP4-204ENST00000414057 Q9H3A6 140 aa12.68□□□□□ -0.38
SCAMP4-204ENST00000414057 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 ZNF207O43670 478 aaKnown RBP12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 NDUFB4O95168 129 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 SIGLEC15Q6ZMC9 328 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 SLC50A1Q9BRV3 221 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 AAMDCQ9H7C9 122 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
SCAMP4-204ENST00000414057 PGPA6NDG6 321 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 HELTA6NFD8 242 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 CBLN1P23435 193 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 GUCA2BQ16661 112 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 TVP23CQ96ET8 276 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 CLEC5AQ9NY25 188 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 EPDR1Q9UM22 224 aa12.66□□□□□ -0.38
SCAMP4-204ENST00000414057 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 SLC25A5P05141 298 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 S100A9P06702 114 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 TMEM241Q24JQ0 296 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 ADAMTSL5Q6ZMM2 481 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 C2CD4CQ8TF44 421 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 B4DEV8 164 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 C9JCJ5 164 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 PEX7O00628 323 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 AKR1C3P42330 323 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 RHEBQ15382 184 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 TM4SF20Q53R12 229 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 SAMD13Q5VXD3 122 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 RHPN1-AS1Q9BWJ2 59 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 SDF2L1Q9HCN8 221 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
SCAMP4-204ENST00000414057 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 TMEM213A2RRL7 107 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 H3BTX0 84 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 CHEK1O14757 476 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 SNRPCP09234 159 aaKnown RBP12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 TAS2R60P59551 318 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 C17orf77Q96MU5 243 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 PRELID1Q9Y255 219 aa12.64□□□□□ -0.39
SCAMP4-204ENST00000414057 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 IGHV3-49A0A0A0MS15 119 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 IGHV3-66A0A0C4DH42 116 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 K7EQM0 130 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 M0R036 132 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 SLC17A3O00476 420 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 RPL35P42766 123 aaKnown RBP12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 CSN1S1P47710 185 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
SCAMP4-204ENST00000414057 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
SCAMP4-204ENST00000414057 TCRAP04437 139 aa12.62□□□□□ -0.39
SCAMP4-204ENST00000414057 EXOC3-AS1Q8N2X6 119 aa12.62□□□□□ -0.39
SCAMP4-204ENST00000414057 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
SCAMP4-204ENST00000414057 DERL1Q9BUN8 251 aa12.62□□□□□ -0.39
SCAMP4-204ENST00000414057 KLF12Q9Y4X4 402 aa12.62□□□□□ -0.39
SCAMP4-204ENST00000414057 TRAV25A0A0B4J276 109 aa12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 FBLL1A6NHQ2 334 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 CD7P09564 240 aa12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 LINC00322Q6ZN03 302 aaPredicted RBP12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 SMIM12Q96EX1 92 aa12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms