RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 PSMG4Q5JS54 123 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 KPRPQ5T749 579 aaPredicted RBP13.92□□□□□ -0.18
CDC42-204ENST00000411827 EBLN2Q6P2I7 272 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 FOXI2Q6ZQN5 318 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 ZNF738Q8NE65 137 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 FAM210AQ96ND0 272 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 SELENOKQ9Y6D0 94 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
CDC42-204ENST00000411827 RBAKDNA6NC62 111 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 C11orf94C9JXX5 98 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 SLC25A5P05141 298 aaKnown RBP13.91□□□□□ -0.18
CDC42-204ENST00000411827 SNRPCP09234 159 aaKnown RBP13.91□□□□□ -0.18
CDC42-204ENST00000411827 CD81P60033 236 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 CCDC28AQ8IWP9 274 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 EXOC3-AS1Q8N2X6 119 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 MAP6D1Q9H9H5 199 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 EPDR1Q9UM22 224 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 YTHDF2Q9Y5A9 579 aaKnown RBP13.91□□□□□ -0.18
CDC42-204ENST00000411827 SORL1Q92673 2214 aa13.91□□□□□ -0.18
CDC42-204ENST00000411827 RAB19A4D1S5 217 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 GGTLC3B5MD39 225 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 DUSP14O95147 198 aaKnown RBP13.9□□□□□ -0.18
CDC42-204ENST00000411827 S100A9P06702 114 aaKnown RBP13.9□□□□□ -0.18
CDC42-204ENST00000411827 DEFB131AP59861 70 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 ODF3L2Q3SX64 289 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 ZNF506Q5JVG8 444 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 OR10J6PQ8NGY7 276 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 CLUHP3Q96NS8 147 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 ATG101Q9BSB4 218 aa13.9□□□□□ -0.18
CDC42-204ENST00000411827 LOC102723971A0A1B0GUV8 181 aa13.89□□□□□ -0.19
CDC42-204ENST00000411827 G3V4G9 280 aa13.89□□□□□ -0.19
CDC42-204ENST00000411827 PEA15Q15121 130 aa13.89□□□□□ -0.19
CDC42-204ENST00000411827 HAGHQ16775 308 aa13.89□□□□□ -0.19
CDC42-204ENST00000411827 RNF182Q8N6D2 247 aa13.89□□□□□ -0.19
CDC42-204ENST00000411827 EIF5A2Q9GZV4 153 aaKnown RBP13.89□□□□□ -0.19
CDC42-204ENST00000411827 DIRC3C9JPN6 131 aa13.88□□□□□ -0.19
CDC42-204ENST00000411827 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
CDC42-204ENST00000411827 TCRAP04437 139 aa13.88□□□□□ -0.19
CDC42-204ENST00000411827 FAM24BQ8N5W8 94 aa13.88□□□□□ -0.19
CDC42-204ENST00000411827 CYB561D1Q8N8Q1 229 aa13.88□□□□□ -0.19
CDC42-204ENST00000411827 SAV1Q9H4B6 383 aaPredicted RBP13.88□□□□□ -0.19
CDC42-204ENST00000411827 PKD1L1Q8TDX9 2849 aa13.88□□□□□ -0.19
CDC42-204ENST00000411827 MGAM2Q2M2H8 2515 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 M0R3E3 92 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 CD7P09564 240 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 OR8A1Q8NGG7 326 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 PCNPQ8WW12 178 aaKnown RBP13.87□□□□□ -0.19
CDC42-204ENST00000411827 C20orf173Q96LM9 149 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 LINC00477Q96M19 166 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
CDC42-204ENST00000411827 TRBV7-9A0A0J9YWB2 115 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 A0A0J9YX75 114 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 PEX7O00628 323 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 HLA-DRB4P13762 266 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 IGFL4Q6B9Z1 124 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 C9orf47Q6ZRZ4 202 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 C11orf52Q96A22 123 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 PPP1R14DQ9NXH3 145 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 LENEPQ9Y5L5 61 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 HLA-DRB4X5D2U9 266 aa13.86□□□□□ -0.19
CDC42-204ENST00000411827 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 HLA-DMBP28068 263 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 ATP5G3P48201 142 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 TOR2AQ5JU69 321 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 UQCC3Q6UW78 93 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 STHQ8IWL8 128 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 ODF3Q96PU9 254 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 KLF12Q9Y4X4 402 aa13.85□□□□□ -0.19
CDC42-204ENST00000411827 ZNF705FA8MVS1 300 aaPredicted RBP13.84□□□□□ -0.19
CDC42-204ENST00000411827 NPIPB6E9PJ23 425 aa13.84□□□□□ -0.19
CDC42-204ENST00000411827 CNN1P51911 297 aaKnown RBP13.84□□□□□ -0.19
CDC42-204ENST00000411827 KRTAP10-11P60412 298 aa13.84□□□□□ -0.19
CDC42-204ENST00000411827 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
CDC42-204ENST00000411827 TMEM78Q5T7P6 136 aa13.84□□□□□ -0.19
CDC42-204ENST00000411827 Q8N1Y9 231 aa13.84□□□□□ -0.19
CDC42-204ENST00000411827 TMEM75Q8N9X5 138 aa13.84□□□□□ -0.19
CDC42-204ENST00000411827 TRBV6-1A0A0K0K1D8 114 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 A8MTW9 85 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 A8MZ25 164 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 H3BMM0 161 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 ACTL10Q5JWF8 245 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 EIF4E3Q8N5X7 224 aaKnown RBP13.83□□□□□ -0.2
CDC42-204ENST00000411827 FMC1Q96HJ9 113 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 RARRES2Q99969 163 aa13.83□□□□□ -0.2
CDC42-204ENST00000411827 AMBPP02760 352 aa13.82□□□□□ -0.2
CDC42-204ENST00000411827 TSPOP30536 169 aa13.82□□□□□ -0.2
CDC42-204ENST00000411827 HIST1H1AQ02539 215 aaPredicted RBP13.82□□□□□ -0.2
CDC42-204ENST00000411827 SAPCD1Q5SSQ6 148 aa13.82□□□□□ -0.2
CDC42-204ENST00000411827 APRG1Q8IVJ8 170 aa13.82□□□□□ -0.2
CDC42-204ENST00000411827 PRR25Q96S07 402 aa13.82□□□□□ -0.2
CDC42-204ENST00000411827 TUBA4BQ9H853 241 aa13.82□□□□□ -0.2
CDC42-204ENST00000411827 MEGF8Q7Z7M0 2845 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 PRAC2D3DTV9 90 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 AKR1C3P42330 323 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 ZNF138P52744 262 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 TAS2R60P59551 318 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 UBE2G1P62253 170 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 NDUFA5Q16718 116 aa13.81□□□□□ -0.2
CDC42-204ENST00000411827 TMEM183BQ1AE95 376 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms