RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 RAX2Q96IS3 184 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 PROCRQ9UNN8 238 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 MED13Q9UHV7 2174 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 MAGEA5P43359 124 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 IGHV4-39P01824 125 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
DUSP28-202ENST00000405954 POLEQ07864 2286 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
DUSP28-202ENST00000405954 Q86TA4 180 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 HIGD1AQ9Y241 93 aa11.23□□□□□ -0.61
DUSP28-202ENST00000405954 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
DUSP28-202ENST00000405954 TRAV4A0A0B4J268 109 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 PATE3B3GLJ2 98 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 TNFRSF18Q9Y5U5 241 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 WDR86Q86TI4 376 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 CFIP05156 583 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
DUSP28-202ENST00000405954 IGHV5-10-1A0A0J9YXX1 117 aa11.21□□□□□ -0.61
DUSP28-202ENST00000405954 C9orf153Q5TBE3 101 aa11.21□□□□□ -0.61
DUSP28-202ENST00000405954 C17orf82Q86X59 251 aaPredicted RBP11.21□□□□□ -0.61
DUSP28-202ENST00000405954 RAB1BQ9H0U4 201 aa11.21□□□□□ -0.61
DUSP28-202ENST00000405954 PLGLAQ15195 96 aa11.21□□□□□ -0.62
DUSP28-202ENST00000405954 MRPS17Q9Y2R5 130 aaKnown RBP11.21□□□□□ -0.62
DUSP28-202ENST00000405954 TRAV2A0A0B4J234 112 aa11.21□□□□□ -0.62
DUSP28-202ENST00000405954 HERVK_113P61574 105 aa11.21□□□□□ -0.62
DUSP28-202ENST00000405954 MAPKAPK5-AS1Q8N8E1 139 aa11.21□□□□□ -0.62
DUSP28-202ENST00000405954 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.62
DUSP28-202ENST00000405954 CSMD1Q96PZ7 3565 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 UPK2O00526 184 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 LYZL6O75951 148 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 SAA1P0DJI8 122 aaPredicted RBP11.2□□□□□ -0.62
DUSP28-202ENST00000405954 RPL13AP40429 203 aaKnown RBP11.2□□□□□ -0.62
DUSP28-202ENST00000405954 ZNF56Q15929 161 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 CFAP126Q5VTH2 177 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 MOGAT3Q86VF5 341 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 ATP6V0E2Q8NHE4 81 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
DUSP28-202ENST00000405954 CACNA1BQ00975 2339 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
DUSP28-202ENST00000405954 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
DUSP28-202ENST00000405954 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
DUSP28-202ENST00000405954 M0R3E3 92 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 SLC25A20O43772 301 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 MZT1Q08AG7 82 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 CNEP1R1Q8N9A8 125 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 CXXC4Q9H2H0 198 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 IGLV3-19P01714 112 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 ZNF134P52741 427 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
DUSP28-202ENST00000405954 PROP1O75360 226 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 TAL2Q16559 108 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 NXT2Q9NPJ8 142 aaKnown RBP11.18□□□□□ -0.62
DUSP28-202ENST00000405954 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 TACC2O95359 2948 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
DUSP28-202ENST00000405954 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
DUSP28-202ENST00000405954 C19orf71A6NCJ1 209 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 FOLR3P41439 243 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 DIAPH2-AS1Q14236 149 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 SPINK14Q6IE38 97 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 HES7Q9BYE0 225 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 RHODO00212 210 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 GGNQ86UU5 652 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 A0A096LNJ9 63 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 ZNRD1Q9P1U0 126 aa11.17□□□□□ -0.62
DUSP28-202ENST00000405954 PKDREJQ9NTG1 2253 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 C5orf47Q569G3 176 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 KLF14Q8TD94 323 aaPredicted RBP11.16□□□□□ -0.62
DUSP28-202ENST00000405954 SPRY4Q9C004 299 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 RPUSD1Q9UJJ7 312 aaKnown RBP11.16□□□□□ -0.62
DUSP28-202ENST00000405954 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 BRI3O95415 125 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 EFNA4P52798 201 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 SCGB3A1Q96QR1 104 aa11.16□□□□□ -0.62
DUSP28-202ENST00000405954 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 FHL3Q13643 280 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 Q6ZQT7 251 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 MLST8Q9BVC4 326 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 KALRNO60229 2985 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 GATA1P15976 413 aaPredicted RBP11.15□□□□□ -0.62
DUSP28-202ENST00000405954 PCOLCEQ15113 449 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 FAM201AQ5SY85 155 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
DUSP28-202ENST00000405954 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms