RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 EIF3GO75821 320 aaKnown RBP eCLIP10.03□□□□□ -0.8
VPREB1-202ENST00000403807 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
VPREB1-202ENST00000403807 TPT1P13693 172 aaKnown RBP10.03□□□□□ -0.8
VPREB1-202ENST00000403807 C4BPBP20851 252 aa10.03□□□□□ -0.8
VPREB1-202ENST00000403807 CNN1P51911 297 aaKnown RBP10.03□□□□□ -0.8
VPREB1-202ENST00000403807 HIST1H1AQ02539 215 aaPredicted RBP10.03□□□□□ -0.8
VPREB1-202ENST00000403807 ZFP69Q49AA0 526 aa10.03□□□□□ -0.8
VPREB1-202ENST00000403807 BAP18Q8IXM2 172 aa10.03□□□□□ -0.8
VPREB1-202ENST00000403807 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
VPREB1-202ENST00000403807 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
VPREB1-202ENST00000403807 PPP1R14DQ9NXH3 145 aa10.03□□□□□ -0.8
VPREB1-202ENST00000403807 CXorf1O96002 111 aa10.02□□□□□ -0.81
VPREB1-202ENST00000403807 GIG44P09565 113 aaPredicted RBP10.02□□□□□ -0.81
VPREB1-202ENST00000403807 ZNF705DP0CH99 300 aaPredicted RBP10.02□□□□□ -0.81
VPREB1-202ENST00000403807 ZNF705BP0CI00 300 aaPredicted RBP10.02□□□□□ -0.81
VPREB1-202ENST00000403807 RANP62826 216 aaKnown RBP10.02□□□□□ -0.81
VPREB1-202ENST00000403807 ICAM4Q14773 271 aa10.02□□□□□ -0.81
VPREB1-202ENST00000403807 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
VPREB1-202ENST00000403807 OR10J6PQ8NGY7 276 aa10.02□□□□□ -0.81
VPREB1-202ENST00000403807 CTXND1A0A1B0GTU2 59 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 A8MTW9 85 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 FXYD7P58549 80 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 CD300CQ08708 224 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 FAM74A1Q5RGS3 127 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 STOML3Q8TAV4 291 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 PHYHIPLQ96FC7 376 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 RARRES2Q99969 163 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 XCL2Q9UBD3 114 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 AGRNO00468 2067 aa10.01□□□□□ -0.81
VPREB1-202ENST00000403807 HUWE1Q7Z6Z7 4374 aaKnown RBP10.01□□□□□ -0.81
VPREB1-202ENST00000403807 UMAD1C9J7I0 102 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 PRAC2D3DTV9 90 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 M0R3E3 92 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 AMBPP02760 352 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 CSN1S1P47710 185 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 EIF5AL1Q6IS14 154 aaKnown RBP10□□□□□ -0.81
VPREB1-202ENST00000403807 OR11H2Q8NH07 326 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 Q9H3A6 140 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 TMEM167BQ9NRX6 74 aa10□□□□□ -0.81
VPREB1-202ENST00000403807 PGPA6NDG6 321 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 PRB4P10163 310 aaPredicted RBP9.99□□□□□ -0.81
VPREB1-202ENST00000403807 GCHFRP30047 84 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 SLC51BQ86UW2 128 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 CSNK1G2-AS1Q8NCQ2 148 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 RXFP4Q8TDU9 374 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
VPREB1-202ENST00000403807 ZNF726P1Q15940 193 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 SSX7Q7RTT5 188 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 IQCF2Q8IXL9 164 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 SUN5Q8TC36 379 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 LINC00477Q96M19 166 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 COL7A1Q02388 2944 aa9.98□□□□□ -0.81
VPREB1-202ENST00000403807 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 BOLA2-SMG1P6H3BVE0 249 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 TSPOP30536 169 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 DPPA3Q6W0C5 159 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
VPREB1-202ENST00000403807 MAP1LC3B2A6NCE7 125 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 ZNF705EA8MWA4 302 aaPredicted RBP9.96□□□□□ -0.82
VPREB1-202ENST00000403807 NPIPB6E9PJ23 425 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 M0R2Z0 102 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 CDKN1BP46527 198 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 FHITP49789 147 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 ARL6IP6Q8N6S5 226 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 FAM213BQ8TBF2 198 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 IGF2BP2-AS1Q96M15 143 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 MAP1LC3BQ9GZQ8 125 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 EDA2RQ9HAV5 297 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 GOLT1BQ9Y3E0 138 aa9.96□□□□□ -0.82
VPREB1-202ENST00000403807 RBAKDNA6NC62 111 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 DIRC3C9JPN6 131 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 INSP01308 110 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 CT45A10P0DMU9 189 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 MIFP14174 115 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 RAB5CP51148 216 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 FGF8P55075 233 aaPredicted RBP9.95□□□□□ -0.82
VPREB1-202ENST00000403807 ERCC8Q13216 396 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 SFT2D1Q8WV19 159 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 ODF3Q96PU9 254 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 AGPAT4-IT1Q9H0P7 198 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 TMPRSS5Q9H3S3 457 aa9.95□□□□□ -0.82
VPREB1-202ENST00000403807 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
VPREB1-202ENST00000403807 IGHV3OR16-12A0A075B7B8 117 aa9.94□□□□□ -0.82
VPREB1-202ENST00000403807 IGKV2-40A0A087WW87 121 aaPredicted RBP9.94□□□□□ -0.82
VPREB1-202ENST00000403807 A0A0J9YWU9 116 aa9.94□□□□□ -0.82
VPREB1-202ENST00000403807 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
VPREB1-202ENST00000403807 SMIM9A6NGZ8 99 aa9.94□□□□□ -0.82
VPREB1-202ENST00000403807 CRXO43186 299 aaPredicted RBP9.94□□□□□ -0.82
VPREB1-202ENST00000403807 IGKV2D-40P01614 121 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms