RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	SSX7	Q7RTT5	188 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR10J6P	Q8NGY7	276 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	RBPMS	Q93062	196 aa	Known RBP	4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	GPR146	Q96CH1	333 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461		Q9H8V8	135 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SDF2L1	Q9HCN8	221 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	VCX3A	Q9NNX9	186 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	CACNG5	Q9UF02	275 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461		U3KQ87	197 aa		4.69	□□□□□ -1.66
CEACAM1-208	ENST00000403461	MUC4	Q99102	2169 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	DNAH17	Q9UFH2	4485 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461		A0A0G2JRQ6	117 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461		F6UB75	175 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SOCS3	O14543	225 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	CFD	P00746	253 aa	Predicted RBP	4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	DEFB1	P60022	68 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SCGB2B2	Q4G0G5	96 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	LBH	Q53QV2	105 aa	Predicted RBP	4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	NMS	Q5H8A3	153 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TMEM256	Q8N2U0	113 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	BPIFC	Q8NFQ6	507 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	C15orf40	Q8WUR7	153 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	FRZB	Q92765	325 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	C16orf74	Q96GX8	76 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	LINC01587	Q99440	93 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TMEM222	Q9H0R3	208 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	NDUFA13	Q9P0J0	144 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	COMMD3	Q9UBI1	195 aa		4.68	□□□□□ -1.66
CEACAM1-208	ENST00000403461	HERC1	Q15751	4861 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	HSPG2	P98160	4391 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	PIGBOS1	A0A0B4J2F0	54 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	FAM25A	B3EWG3	89 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	FAM25C	B3EWG5	89 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	FAM25G	B3EWG6	89 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	CDS2	O95674	445 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR5AC1	P0C628	307 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SULT1A3	P0DMM9	295 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SULT1A4	P0DMN0	295 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	M6PR	P20645	277 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	GPX4	P36969	197 aa	Predicted RBP	4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TAS2R19	P59542	299 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TAS2R60	P59551	318 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	VBP1	P61758	197 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	DLK1	P80370	383 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR5I1	Q13606	314 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SURF2	Q15527	256 aa	Predicted RBP	4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SPINK13	Q1W4C9	94 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	RGS21	Q2M5E4	152 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	LHFPL1	Q86WI0	220 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	LGI3	Q8N145	548 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR13C8	Q8NGS7	320 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TERB2	Q8NHR7	220 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	DTD1	Q8TEA8	209 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	GPR82	Q96P67	336 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	KRTAP2-2	Q9BYT5	123 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461		Q9H3A6	140 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	NAA60	Q9H7X0	242 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	SLC25A22	Q9H936	323 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	NUDT15	Q9NV35	164 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	GPR132	Q9UNW8	380 aa		4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.67	□□□□□ -1.66
CEACAM1-208	ENST00000403461	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461		M0R2Z0	102 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	RAB3D	O95716	219 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	IFNA5	P01569	189 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	CD3D	P04234	171 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	PRSS1	P07477	247 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	HTN1	P15515	57 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	RHOB	P62745	196 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	ZNF90	Q03938	601 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR2F1	Q13607	317 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	MEF2D	Q14814	521 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	ZNF493	Q6ZR52	646 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TMEM144	Q7Z5S9	345 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	BAP18	Q8IXM2	172 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	ZNF738	Q8NE65	137 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR11H7	Q8NGC8	314 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	OR1B1	Q8NGR6	318 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	ENKUR	Q8TC29	256 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	MARCH1	Q8TCQ1	289 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	AP3S1	Q92572	193 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	IL22RA2	Q969J5	263 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TRGV9	Q99603	122 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	UPK3B	Q9BT76	320 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	RSG1	Q9BU20	258 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TMEM147	Q9BVK8	224 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	PAIP2B	Q9ULR5	123 aa	Known RBP	4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	KCNIP3	Q9Y2W7	256 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	DNAH5	Q8TE73	4624 aa		4.66	□□□□□ -1.66
CEACAM1-208	ENST00000403461	TRAV12-2	A0A075B6T6	113 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	TRAV26-1	A0A087WT03	109 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A087WYN8	130 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A8MTW9	85 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	DISC1	C4P0D8	188 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RLN2	P04090	185 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	AKR1C4	P17516	323 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CCR6	P51684	374 aa		4.65	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LSM3	P62310	102 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms