RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ARL16Q0P5N6 197 aa8.18□□□□□ -1.1
LINC00544-201ENST00000400540 TEPPQ6URK8 271 aa8.18□□□□□ -1.1
LINC00544-201ENST00000400540 TMEM37Q8WXS4 190 aa8.18□□□□□ -1.1
LINC00544-201ENST00000400540 SMIM8Q96KF7 97 aa8.18□□□□□ -1.1
LINC00544-201ENST00000400540 NPVFQ9HCQ7 196 aa8.18□□□□□ -1.1
LINC00544-201ENST00000400540 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
LINC00544-201ENST00000400540 H3BQ15 152 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 AGPAT2O15120 278 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 IGLC2P0DOY2 106 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 OPCMLQ14982 345 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 BPIFA4PQ86YQ2 179 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 ZNF431Q8TF32 576 aaPredicted RBP8.17□□□□□ -1.1
LINC00544-201ENST00000400540 MGST2Q99735 147 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 BCL7BQ9BQE9 202 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 MGAT4CQ9UBM8 478 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 FLVCR2Q9UPI3 526 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 RCL1Q9Y2P8 373 aaKnown RBP8.17□□□□□ -1.1
LINC00544-201ENST00000400540 TNFRSF18Q9Y5U5 241 aa8.17□□□□□ -1.1
LINC00544-201ENST00000400540 TRAV5A0A0B4J249 113 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 GOSR2O14653 212 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 COX7A2P2O60397 106 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 XGP55808 180 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 UBE2MP61081 183 aaKnown RBP8.16□□□□□ -1.1
LINC00544-201ENST00000400540 DMRTA1Q5VZB9 504 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 S100A7AQ86SG5 101 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 ZNF546Q86UE3 836 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 C11orf72Q8NBR9 251 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 SAT2Q96F10 170 aaPredicted RBP8.16□□□□□ -1.1
LINC00544-201ENST00000400540 GSN-AS1Q9NRJ2 163 aa8.16□□□□□ -1.1
LINC00544-201ENST00000400540 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 DNAH10OSP0CZ25 163 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 INAFM2P0DMQ5 153 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 LEPP41159 167 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
LINC00544-201ENST00000400540 ERCC8Q13216 396 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 PXDC1Q5TGL8 231 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 LYPD1Q8N2G4 141 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 PYGO2Q9BRQ0 406 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
LINC00544-201ENST00000400540 TRGV1A0A0A0MS02 117 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 SIVA1O15304 175 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 NOL3O60936 208 aaKnown RBP8.14□□□□□ -1.11
LINC00544-201ENST00000400540 TSC22D2O75157 780 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 NXPH4O95158 308 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 OR4E1P0C645 316 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 BTN1A1Q13410 526 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 IAH1Q2TAA2 248 aaPredicted RBP8.14□□□□□ -1.11
LINC00544-201ENST00000400540 Q5VSD8 79 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 ODF3Q96PU9 254 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 RNF24Q9Y225 148 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 KLF12Q9Y4X4 402 aa8.14□□□□□ -1.11
LINC00544-201ENST00000400540 C7orf66A4D0T2 115 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 C7orf71A4D174 169 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 M0R3E3 92 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 NDUFB6O95139 128 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 IGHV3-53P01767 116 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 KRTAP10-1P60331 282 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 ERVFC1-1P60608 527 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 CD300CQ08708 224 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 DEDD2Q8WXF8 326 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 FUT9Q9Y231 359 aa8.13□□□□□ -1.11
LINC00544-201ENST00000400540 ZNF324O75467 553 aaPredicted RBP8.12□□□□□ -1.11
LINC00544-201ENST00000400540 MBPP02686 304 aaPredicted RBP8.12□□□□□ -1.11
LINC00544-201ENST00000400540 TAS2R30P59541 319 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 Q6ZQT7 251 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 ZNF680Q8NEM1 530 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 SRRQ9GZT4 340 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 GSKIPQ9P0R6 139 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 TP53TG3Q9ULZ0 132 aa8.12□□□□□ -1.11
LINC00544-201ENST00000400540 KLLNB2CW77 178 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 CCSO14618 274 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 PAX4O43316 350 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 SPINK4O60575 86 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 SLC25A5P05141 298 aaKnown RBP8.11□□□□□ -1.11
LINC00544-201ENST00000400540 BTCP35070 178 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 CAMLGP49069 296 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 HAMPP81172 84 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 BAK1Q16611 211 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 C4orf46Q504U0 113 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 PRR9Q5T870 116 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 NRARPQ7Z6K4 114 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 EIF4E3Q8N5X7 224 aaKnown RBP8.11□□□□□ -1.11
LINC00544-201ENST00000400540 FAM19A4Q96LR4 140 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 GGACTQ9BVM4 153 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 DNAJC4Q9NNZ3 241 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
LINC00544-201ENST00000400540 ICOSQ9Y6W8 199 aa8.11□□□□□ -1.11
LINC00544-201ENST00000400540 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
LINC00544-201ENST00000400540 A0A087WTM6 91 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 EREGO14944 169 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 NDUFB4O95168 129 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 SMR3BP02814 79 aaPredicted RBP8.1□□□□□ -1.11
LINC00544-201ENST00000400540 S100A5P33763 92 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms