RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 Q6ZPA2 131 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 Q8IYB0 196 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 C3orf56Q8N813 242 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 TAF15Q92804 592 aaKnown RBP eCLIP5.27□□□□□ -1.571e-7■□□□□ 8.1
TM9SF4-202ENST00000398022 RNF7Q9UBF6 113 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 COL6A6A6NMZ7 2263 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 HELZ2Q9BYK8 2649 aaKnown RBP5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 ATP5G3P48201 142 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 SGMS2Q8NHU3 365 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 IGFBPL1Q8WX77 278 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 SRSF12Q8WXF0 261 aaKnown RBP5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 RABAC1Q9UI14 185 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF407Q9C0G0 2248 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 IGKV1-6A0A0C4DH72 117 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 SP5Q6BEB4 398 aaPredicted RBP5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 KIAA1549Q9HCM3 1950 aa5.27□□□□□ -1.57
TM9SF4-202ENST00000398022 A0A1B0GWB2 263 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 SRRM4A7MD48 611 aaKnown RBP5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 J3QT63 122 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 PLAUP00749 431 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 CA7P43166 264 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 SAMD5Q5TGI4 173 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 TCF23Q7RTU1 214 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 ODF3L1Q8IXM7 274 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 FMC1Q96HJ9 113 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 RTL8AQ9BWD3 113 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 Q9H8V8 135 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 RPUSD1Q9UJJ7 312 aaKnown RBP5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 FBN2P35556 2912 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF462Q96JM2 2506 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 A0A0G2JRQ6 117 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 RRN3P1Q2M238 152 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 SH2D6Q7Z4S9 175 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 ANKRD29Q8N6D5 301 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 GNB1LQ9BYB4 327 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 IL36RNQ9UBH0 155 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 PCNX2A6NKB5 2137 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 IGKV3D-15A0A087WSY6 115 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
TM9SF4-202ENST00000398022 CELSR2Q9HCU4 2923 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 LY6G6EA0A0G2JKS1 128 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 NCBP2LA6PVI3 153 aaKnown RBP5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 M0R2P5 195 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 RAB37Q96AX2 223 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 PRSS22Q9GZN4 317 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 SLC25A22Q9H936 323 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 U3KQA8 63 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 SYS1-DBNDD2H3BUS1 97 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 RFPL3SP0C7P2 107 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 CCL4P13236 92 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF726P1Q15940 193 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 GAGE13Q4V321 117 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 SPRNQ5BIV9 151 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 KLF17Q5JT82 389 aaPredicted RBP5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 Q6ZRM9 215 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 SPATA12Q7Z6I5 190 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 C11orf53Q8IXP5 236 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 PPDPFLQ8WWR9 84 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 KLF13Q9Y2Y9 288 aaPredicted RBP5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 CACNA1DQ01668 2161 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 H3BMG7 143 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 K7EMT4 169 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 IGLL1P15814 213 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 GATA2P23769 480 aaPredicted RBP5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 RPL23P62829 140 aaKnown RBP5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 RPL18AQ02543 176 aaKnown RBP5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 KIR3DS1Q14943 382 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 SPRY4Q9C004 299 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 SAP30LQ9HAJ7 183 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 FLNCQ14315 2725 aa5.25□□□□□ -1.57
TM9SF4-202ENST00000398022 IGKV1-5P01602 117 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 DAZAP2Q15038 168 aaPredicted RBP5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 HS3ST6Q96QI5 342 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 OTOGQ6ZRI0 2925 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 NUPR1O60356 82 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 CA6P23280 308 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 INSL3P51460 131 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 LOXL1Q08397 574 aaPredicted RBP5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 ARL16Q0P5N6 197 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 DRAM1Q8N682 238 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 C18orf15Q96N68 181 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 FREM1Q5H8C1 2179 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 DNAJC13O75165 2243 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 TMEM30CPA0ZSE6 113 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 SHISA9B4DS77 424 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 LYZL6O75951 148 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 NGFP01138 241 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 ACP7Q6ZNF0 438 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 C20orf204Q6ZNR8 217 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 RPP25LQ8N5L8 163 aaKnown RBP5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 ARL2-SNX15V9GYD0 113 aa5.24□□□□□ -1.57
TM9SF4-202ENST00000398022 C11orf94C9JXX5 98 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 IGKV1-39P01597 117 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 IGKV1D-39P04432 117 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ATP5G1P05496 136 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 PSMB8P28062 276 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF114Q8NC26 417 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 BRK1Q8WUW1 75 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms