RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 APOMO95445 188 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 CSN3P07498 182 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 RNASE2P10153 161 aaKnown RBP4.01□□□□□ -1.77
SSR1-202ENST00000397511 COX7A1P24310 79 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 NMUP48645 174 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 BCL6BQ8N143 479 aaPredicted RBP4.01□□□□□ -1.77
SSR1-202ENST00000397511 INSIG2Q9Y5U4 225 aa4.01□□□□□ -1.77
SSR1-202ENST00000397511 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
SSR1-202ENST00000397511 A0A1B0GWB2 263 aa4□□□□□ -1.77
SSR1-202ENST00000397511 E9PLD3 99 aa4□□□□□ -1.77
SSR1-202ENST00000397511 PRRG2O14669 202 aa4□□□□□ -1.77
SSR1-202ENST00000397511 COX7A2P2O60397 106 aa4□□□□□ -1.77
SSR1-202ENST00000397511 NCR2O95944 276 aa4□□□□□ -1.77
SSR1-202ENST00000397511 ZNF138P52744 262 aa4□□□□□ -1.77
SSR1-202ENST00000397511 ERHP84090 104 aaKnown RBP4□□□□□ -1.77
SSR1-202ENST00000397511 GFRALQ6UXV0 394 aa4□□□□□ -1.77
SSR1-202ENST00000397511 Q6ZS92 163 aa4□□□□□ -1.77
SSR1-202ENST00000397511 LINC00305Q7Z4B0 112 aa4□□□□□ -1.77
SSR1-202ENST00000397511 SYT8Q8NBV8 401 aa4□□□□□ -1.77
SSR1-202ENST00000397511 OR8A1Q8NGG7 326 aa4□□□□□ -1.77
SSR1-202ENST00000397511 C20orf78Q9BR46 151 aa4□□□□□ -1.77
SSR1-202ENST00000397511 HIF1ANQ9NWT6 349 aa4□□□□□ -1.77
SSR1-202ENST00000397511 CTSZQ9UBR2 303 aa4□□□□□ -1.77
SSR1-202ENST00000397511 LINC00312Q9Y6C7 94 aa4□□□□□ -1.77
SSR1-202ENST00000397511 CELSR2Q9HCU4 2923 aa4□□□□□ -1.77
SSR1-202ENST00000397511 H3BMG7 143 aa4□□□□□ -1.77
SSR1-202ENST00000397511 NDUFB3O43676 98 aa4□□□□□ -1.77
SSR1-202ENST00000397511 APOHP02749 345 aaPredicted RBP4□□□□□ -1.77
SSR1-202ENST00000397511 TNFRSF1AP19438 455 aa4□□□□□ -1.77
SSR1-202ENST00000397511 CFHR2P36980 270 aa4□□□□□ -1.77
SSR1-202ENST00000397511 KIR2DS2P43631 304 aa4□□□□□ -1.77
SSR1-202ENST00000397511 ZNF137PP52743 207 aa4□□□□□ -1.77
SSR1-202ENST00000397511 CD69Q07108 199 aa4□□□□□ -1.77
SSR1-202ENST00000397511 CR1LQ2VPA4 569 aa4□□□□□ -1.77
SSR1-202ENST00000397511 LGALS9BQ3B8N2 356 aa4□□□□□ -1.77
SSR1-202ENST00000397511 LGALS9CQ6DKI2 356 aa4□□□□□ -1.77
SSR1-202ENST00000397511 Q71RC1 249 aaPredicted RBP4□□□□□ -1.77
SSR1-202ENST00000397511 SMIM20Q8N5G0 67 aa4□□□□□ -1.77
SSR1-202ENST00000397511 LINC01560Q8TB33 94 aa4□□□□□ -1.77
SSR1-202ENST00000397511 SLC25A33Q9BSK2 321 aa4□□□□□ -1.77
SSR1-202ENST00000397511 UFC1Q9Y3C8 167 aa4□□□□□ -1.77
SSR1-202ENST00000397511 AMMECR1Q9Y4X0 333 aaPredicted RBP4□□□□□ -1.77
SSR1-202ENST00000397511 SPG11Q96JI7 2443 aa4□□□□□ -1.77
SSR1-202ENST00000397511 TRAV8-1A0A0A6YYK1 113 aa4□□□□□ -1.77
SSR1-202ENST00000397511 FAM90A9PA6NNJ1 464 aa4□□□□□ -1.77
SSR1-202ENST00000397511 K7ERJ3 54 aa4□□□□□ -1.77
SSR1-202ENST00000397511 MT-ATP8P03928 68 aa4□□□□□ -1.77
SSR1-202ENST00000397511 THBDP07204 575 aa4□□□□□ -1.77
SSR1-202ENST00000397511 C8orf88P0DMB2 117 aa4□□□□□ -1.77
SSR1-202ENST00000397511 GRNP28799 593 aaKnown RBP4□□□□□ -1.77
SSR1-202ENST00000397511 INSL3P51460 131 aa4□□□□□ -1.77
SSR1-202ENST00000397511 FXYD2P54710 66 aa4□□□□□ -1.77
SSR1-202ENST00000397511 TCTAP57738 103 aa4□□□□□ -1.77
SSR1-202ENST00000397511 RPL32P62910 135 aaKnown RBP4□□□□□ -1.77
SSR1-202ENST00000397511 C10orf113Q5VZT2 155 aa4□□□□□ -1.77
SSR1-202ENST00000397511 LCNL1Q6ZST4 164 aa4□□□□□ -1.77
SSR1-202ENST00000397511 Q6ZUT4 128 aa4□□□□□ -1.77
SSR1-202ENST00000397511 ATP6V0E2Q8NHE4 81 aa4□□□□□ -1.77
SSR1-202ENST00000397511 PRSS3P2Q8NHM4 247 aa4□□□□□ -1.77
SSR1-202ENST00000397511 RAX2Q96IS3 184 aa4□□□□□ -1.77
SSR1-202ENST00000397511 PGLYRP4Q96LB8 373 aa4□□□□□ -1.77
SSR1-202ENST00000397511 SLC25A2Q9BXI2 301 aa4□□□□□ -1.77
SSR1-202ENST00000397511 RPP21Q9H633 154 aaKnown RBP4□□□□□ -1.77
SSR1-202ENST00000397511 NHP2Q9NX24 153 aaKnown RBP4□□□□□ -1.77
SSR1-202ENST00000397511 HIGD1BQ9P298 99 aa4□□□□□ -1.77
SSR1-202ENST00000397511 TNFRSF18Q9Y5U5 241 aa4□□□□□ -1.77
SSR1-202ENST00000397511 A0A1W2PPI3 338 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CGB1A6NKQ9 187 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 IGLL5B9A064 214 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FOXI1Q12951 378 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PLGLAQ15195 96 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PSMG4Q5JS54 123 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 ZFAND6Q6FIF0 208 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PATE2Q6UY27 113 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 OR4C13Q8NGP0 309 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 OR1L8Q8NGR8 309 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FAM57AQ8TBR7 257 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PAXXQ9BUH6 204 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 C1QTNF4Q9BXJ3 329 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CDIP1Q9H305 208 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 NDUFA4L2Q9NRX3 87 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CENPEQ02224 2701 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 IGHV3OR16-8A0A075B7F1 116 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PEX7O00628 323 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CT45A10P0DMU9 189 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FOXC1Q12948 553 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CT83Q5H943 113 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 RBPMS2Q6ZRY4 209 aaKnown RBP3.99□□□□□ -1.77
SSR1-202ENST00000397511 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PRSS33Q8NF86 280 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PHLDA1Q8WV24 401 aaPredicted RBP3.99□□□□□ -1.77
SSR1-202ENST00000397511 VCX2Q9H322 139 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 UTP20O75691 2785 aaKnown RBP3.99□□□□□ -1.77
SSR1-202ENST00000397511 TCRBV4S1A1TA0A5B7 111 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 PGPA6NDG6 321 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FAM90A27PA6NNH2 459 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CEACAM4O75871 244 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 P01737 135 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 SLC25A5P05141 298 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms