RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TMEM213A2RRL7 107 aa8.21□□□□□ -1.1
CPSF1P1-201ENST00000397477 GOSR1O95249 250 aa8.21□□□□□ -1.1
CPSF1P1-201ENST00000397477 NCR2O95944 276 aa8.21□□□□□ -1.1
CPSF1P1-201ENST00000397477 ATP5J2P56134 94 aa8.21□□□□□ -1.1
CPSF1P1-201ENST00000397477 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
CPSF1P1-201ENST00000397477 UFC1Q9Y3C8 167 aa8.21□□□□□ -1.1
CPSF1P1-201ENST00000397477 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 A1L4Q6 167 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 MAPK1IP1LQ8NDC0 245 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 OR4B1Q8NGF8 309 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 FAM181BA6NEQ2 426 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 M0R1W7 72 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 KLHDC1Q8N7A1 406 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 MIEN1Q9BRT3 115 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 INS-IGF2F8WCM5 200 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 OR5AL1P0C617 328 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 PF4V1P10720 104 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 EFNA4P52798 201 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 NRGNQ92686 78 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 FANCD2OSQ96PS1 177 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 RNF24Q9Y225 148 aa8.2□□□□□ -1.1
CPSF1P1-201ENST00000397477 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 LTAP01374 205 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 SRD5A1P18405 259 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 PTTG1IPP53801 180 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 OR11H6Q8NGC7 330 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 WFDC12Q8WWY7 111 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 VGLL1Q99990 258 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 SOX21Q9Y651 276 aaPredicted RBP8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 OR4C46A6NHA9 309 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 H3BRN7 92 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 LINC00614P0C842 121 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 PSG3Q16557 428 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 FAM231DQ6ZW35 169 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 DEFB104AQ8WTQ1 72 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 C18orf15Q96N68 181 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 RNF5Q99942 180 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 TRGV3P03979 118 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 CKS2P33552 79 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 AMN1Q8IY45 258 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 GLMPQ8WWB7 406 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 CFHR4Q92496 578 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 ZNF414Q96IQ9 312 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 TMEM70Q9BUB7 260 aa8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 MRPL27Q9P0M9 148 aaKnown RBP8.19□□□□□ -1.1
CPSF1P1-201ENST00000397477 IGHV7-81A0A0B4J1V7 117 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 SPRY2O43597 315 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 EBLN2Q6P2I7 272 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 SIGLEC15Q6ZMC9 328 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 PAX1P15863 534 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 Q6ZVH6 145 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 MAP1LC3CQ9BXW4 147 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 FLNCQ14315 2725 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 SH2D1AO60880 128 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 FSTL3O95633 263 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 C16orf92Q96LL3 132 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 CCL19Q99731 98 aa8.18□□□□□ -1.1
CPSF1P1-201ENST00000397477 EVI2AP22794 236 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 LY6G5BQ8NDX9 201 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 C7orf69Q9H7B7 122 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 D6R8Y8 96 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 NPFFO15130 113 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 MYCNOSP40205 109 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 METTL26Q96S19 204 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 ZFP30Q9Y2G7 519 aa8.17□□□□□ -1.1
CPSF1P1-201ENST00000397477 CTSGP08311 255 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 DEFB1P60022 68 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 PSG9Q00887 426 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 ATP5G2Q06055 141 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 FAM162BQ5T6X4 162 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 CLEC2AQ6UVW9 174 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 IGHV2-70DA0A0C4DH43 119 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 S100A4P26447 101 aaKnown RBP8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 DNLZQ5SXM8 178 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 Q8N9W7 124 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 IFI27P40305 119 aaPredicted RBP8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 TEX43Q6ZNM6 134 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 ATP5L2Q7Z4Y8 100 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 ZNF738Q8NE65 137 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 MLST8Q9BVC4 326 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 TMEM191AQ9H0A3 160 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 KLF12Q9Y4X4 402 aa8.16□□□□□ -1.1
CPSF1P1-201ENST00000397477 IGKV3-20P01619 116 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 SAPCD1Q5SSQ6 148 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 TMEM78Q5T7P6 136 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 PIP4P2Q8N4L2 257 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 IGHV1-24A0A0C4DH33 117 aa8.15□□□□□ -1.1
CPSF1P1-201ENST00000397477 H3BUX3 64 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms