RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CYB561D1Q8N8Q1 229 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 TCEAL7Q9BRU2 100 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 SLC35B3Q9H1N7 401 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 TRAV25A0A0B4J276 109 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 ISLRO14498 428 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 GNG5P63218 68 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 RNF182Q8N6D2 247 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 CLEC5AQ9NY25 188 aa12.69□□□□□ -0.38
TSPAN4-205ENST00000397406 TRAV2A0A0B4J234 112 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 TMEM218A2RU14 115 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 PEX7O00628 323 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 TFPI2P48307 235 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 ARL6IP6Q8N6S5 226 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 C20orf173Q96LM9 149 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 PRELID1Q9Y255 219 aa12.68□□□□□ -0.38
TSPAN4-205ENST00000397406 TCRAP04437 139 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 PSG3Q16557 428 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 FAM24BQ8N5W8 94 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 CMTM2Q8TAZ6 248 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 C2CD4CQ8TF44 421 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 HIST1H2BAQ96A08 127 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 ATG101Q9BSB4 218 aa12.67□□□□□ -0.38
TSPAN4-205ENST00000397406 NOTCH3Q9UM47 2321 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 ZNF705FA8MVS1 300 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 DIRC3C9JPN6 131 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 CD33P20138 364 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 LCN12Q6JVE5 192 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 SPAG8Q99932 426 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 DERL1Q9BUN8 251 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 RPH3ALQ9UNE2 315 aa12.66□□□□□ -0.38
TSPAN4-205ENST00000397406 PRB4P10163 310 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 ID1P41134 155 aa12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 INSL3P51460 131 aa12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 CEBPGP53567 150 aa12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 C9orf66Q5T8R8 295 aa12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 PARLQ9H300 379 aa12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 ZNF256Q9Y2P7 627 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-205ENST00000397406 PRAC2D3DTV9 90 aa12.64□□□□□ -0.39
TSPAN4-205ENST00000397406 ATP6V1G1O75348 118 aa12.64□□□□□ -0.39
TSPAN4-205ENST00000397406 CSN1S1P47710 185 aa12.64□□□□□ -0.39
TSPAN4-205ENST00000397406 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
TSPAN4-205ENST00000397406 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
TSPAN4-205ENST00000397406 LINC00052Q96N35 136 aa12.64□□□□□ -0.39
TSPAN4-205ENST00000397406 ZNF688P0C7X2 276 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 IGLL1P15814 213 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 AKR1C3P42330 323 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 SOHLH1Q5JUK2 328 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 C10orf91Q5T1B1 145 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 MCRIP2Q9BUT9 160 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 KLF12Q9Y4X4 402 aa12.63□□□□□ -0.39
TSPAN4-205ENST00000397406 IGKV2-40A0A087WW87 121 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 SERTM2A0A1B0GWG4 89 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 OR4C46A6NHA9 309 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 KRBOX1C9JBD0 128 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 IGKV2D-40P01614 121 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 RPL35P42766 123 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 SORL1Q92673 2214 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 TRAV34A0A0B4J273 112 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 F8W036 122 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 CNN1P51911 297 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 GUCA2BQ16661 112 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 ZNF674Q2M3X9 581 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
TSPAN4-205ENST00000397406 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 DEFB1P60022 68 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 FAM74A3Q4VXF1 159 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 TMEM75Q8N9X5 138 aa12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 CARHSP1Q9Y2V2 147 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-205ENST00000397406 TRAV8-1A0A0A6YYK1 113 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 K7EQM0 130 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 S100A9P06702 114 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 TAS2R60P59551 318 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 SGK494Q96LW2 274 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 IGF2BP2-AS1Q96M15 143 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 VGLL1Q99990 258 aa12.6□□□□□ -0.39
TSPAN4-205ENST00000397406 MAP6D1Q9H9H5 199 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms