RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CTSGP08311 255 aa11.45□□□□□ -0.58
CAPN3-207ENST00000397200 BAGE2Q86Y30 109 aa11.45□□□□□ -0.58
CAPN3-207ENST00000397200 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
CAPN3-207ENST00000397200 GAR1Q9NY12 217 aaKnown RBP11.45□□□□□ -0.58
CAPN3-207ENST00000397200 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
CAPN3-207ENST00000397200 LGALS1P09382 135 aaKnown RBP11.44□□□□□ -0.58
CAPN3-207ENST00000397200 FAM209BQ5JX69 171 aa11.44□□□□□ -0.58
CAPN3-207ENST00000397200 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
CAPN3-207ENST00000397200 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
CAPN3-207ENST00000397200 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
CAPN3-207ENST00000397200 ATP6V0BQ99437 205 aa11.44□□□□□ -0.58
CAPN3-207ENST00000397200 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
CAPN3-207ENST00000397200 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 LTAP01374 205 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 CLEC3BP05452 202 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 SNRPCP09234 159 aaKnown RBP11.43□□□□□ -0.58
CAPN3-207ENST00000397200 MGST1P10620 155 aaKnown RBP11.43□□□□□ -0.58
CAPN3-207ENST00000397200 GPR183P32249 361 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 ADMP35318 185 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 UBE2G1P62253 170 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 PDE6HQ13956 83 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 SIGLEC15Q6ZMC9 328 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 TMEM183AQ8IXX5 376 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 OR4F17Q8NGA8 305 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 C4orf3Q8WVX3 66 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 GPR82Q96P67 336 aa11.43□□□□□ -0.58
CAPN3-207ENST00000397200 A0A1W2PRX2 142 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 RIPPLY3P57055 190 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 GFI1BQ5VTD9 330 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 C18orf65Q6ZTR6 163 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 ZNF492Q9P255 531 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 PEF1Q9UBV8 284 aaKnown RBP11.42□□□□□ -0.58
CAPN3-207ENST00000397200 TRAPPC1Q9Y5R8 145 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 FBN1P35555 2871 aaKnown RBP11.42□□□□□ -0.58
CAPN3-207ENST00000397200 H3BTX0 84 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 ARL3P36405 182 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 C12orf54Q6X4T0 127 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 Q86TA4 180 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 OR8I2Q8N0Y5 310 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 NHLRC2Q8NBF2 726 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 ZFAND3Q9H8U3 227 aa11.42□□□□□ -0.58
CAPN3-207ENST00000397200 IGLV2-11P01706 119 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 COX19Q49B96 90 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 ARL6IP6Q8N6S5 226 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 CITED1Q99966 193 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 GPR61Q9BZJ8 451 aa11.41□□□□□ -0.58
CAPN3-207ENST00000397200 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 RPL19P84098 196 aaKnown RBP11.4□□□□□ -0.58
CAPN3-207ENST00000397200 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 C8orf86Q6ZUL3 223 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 EXOC3-AS1Q8N2X6 119 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 C3orf56Q8N813 242 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 TMEM75Q8N9X5 138 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 NUDT10Q8NFP7 164 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 NUDT11Q96G61 164 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 GRAMD2BQ96HH9 432 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 GNB1LQ9BYB4 327 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
CAPN3-207ENST00000397200 XKRY2A2RUG3 117 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 ZNF705GA8MUZ8 300 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-207ENST00000397200 GATCO43716 136 aaKnown RBP11.39□□□□□ -0.59
CAPN3-207ENST00000397200 S100A2P29034 98 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 S100A7P31151 101 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 CT83Q5H943 113 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 C17orf77Q96MU5 243 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 ZNF747Q9BV97 191 aa11.39□□□□□ -0.59
CAPN3-207ENST00000397200 IZUMO1RA6ND01 250 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 ADARB2-AS1A8MUL3 147 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 BMPR1BO00238 502 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 ZNF253O75346 499 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 MT-ND6P03923 174 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 RPL7P18124 248 aaKnown RBP11.38□□□□□ -0.59
CAPN3-207ENST00000397200 CBLN1P23435 193 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-207ENST00000397200 WDR73Q6P4I2 378 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 OR11H1Q8NG94 326 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 CMTM2Q8TAZ6 248 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 DPF1Q92782 380 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 RPH3ALQ9UNE2 315 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 IGHV4OR15-8A0A075B7B6 117 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 A0A087WW49 117 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 RASL11AQ6T310 242 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 OR1N2Q8NGR9 330 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 HIST1H2BLQ99880 126 aa11.38□□□□□ -0.59
CAPN3-207ENST00000397200 MRPL18Q9H0U6 180 aaKnown RBP11.38□□□□□ -0.59
CAPN3-207ENST00000397200 TENM1Q9UKZ4 2725 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 SERTM2A0A1B0GWG4 89 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 LINC01619G3V211 115 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 TOMM20LQ6UXN7 152 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 TSKUQ8WUA8 353 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 RAX2Q96IS3 184 aa11.37□□□□□ -0.59
CAPN3-207ENST00000397200 A0A087X0K7 114 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms