RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ZNF431Q8TF32 576 aaPredicted RBP10.1□□□□□ -0.79
SEC13-206ENST00000397102 ARV1Q9H2C2 271 aa10.1□□□□□ -0.79
SEC13-206ENST00000397102 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
SEC13-206ENST00000397102 STRAPQ9Y3F4 350 aaKnown RBP10.1□□□□□ -0.79
SEC13-206ENST00000397102 LINC00854A0A1B0GVQ3 168 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 CT45A10P0DMU9 189 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 EVI2AP22794 236 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 MRPL23Q16540 153 aaKnown RBP10.09□□□□□ -0.79
SEC13-206ENST00000397102 NEGR1Q7Z3B1 354 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 ST6GAL2Q96JF0 529 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 ARL6Q9H0F7 186 aa10.09□□□□□ -0.79
SEC13-206ENST00000397102 SLC17A3O00476 420 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 RGS5O15539 181 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 SPINK4O60575 86 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 SNRPCP09234 159 aaKnown RBP10.08□□□□□ -0.8
SEC13-206ENST00000397102 CRYBA4P53673 196 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 SLAQ13239 276 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 C4orf46Q504U0 113 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 TEPPQ6URK8 271 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 WFDC10BQ8IUB3 73 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 ZBTB8BQ8NAP8 495 aaPredicted RBP10.08□□□□□ -0.8
SEC13-206ENST00000397102 DEFB104AQ8WTQ1 72 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 MCUBQ9NWR8 336 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 PXMP4Q9Y6I8 212 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 DNAH8Q96JB1 4490 aa10.08□□□□□ -0.8
SEC13-206ENST00000397102 K7EPK0 472 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 SLC25A5P05141 298 aaKnown RBP10.07□□□□□ -0.8
SEC13-206ENST00000397102 TCL1AP56279 114 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 IL18Q14116 193 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 CTF1Q16619 201 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 ANXA2RQ3ZCQ2 193 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 TMEM128Q5BJH2 165 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 PXDC1Q5TGL8 231 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 BPIFA4PQ86YQ2 179 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 FAM30AQ9NZY2 134 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 RABL2AQ9UBK7 228 aaPredicted RBP10.07□□□□□ -0.8
SEC13-206ENST00000397102 RABL2BQ9UNT1 228 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
SEC13-206ENST00000397102 C7orf71A4D174 169 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 LRCOL1A6NCL2 159 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 PRAF2O60831 178 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 C1QBP02746 253 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 LINC00305Q7Z4B0 112 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 EIF4E3Q8N5X7 224 aaKnown RBP10.06□□□□□ -0.8
SEC13-206ENST00000397102 VGLL1Q99990 258 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 NAA50Q9GZZ1 169 aaKnown RBP10.06□□□□□ -0.8
SEC13-206ENST00000397102 HHLA3Q9XRX5 114 aa10.06□□□□□ -0.8
SEC13-206ENST00000397102 H3BTX0 84 aa10.05□□□□□ -0.8
SEC13-206ENST00000397102 CTDSP2O14595 271 aa10.05□□□□□ -0.8
SEC13-206ENST00000397102 PSCAO43653 123 aa10.05□□□□□ -0.8
SEC13-206ENST00000397102 VAMP1P23763 118 aa10.05□□□□□ -0.8
SEC13-206ENST00000397102 IBA57Q5T440 356 aaKnown RBP10.05□□□□□ -0.8
SEC13-206ENST00000397102 SAT2Q96F10 170 aaPredicted RBP10.05□□□□□ -0.8
SEC13-206ENST00000397102 C8orf49Q96NF6 230 aa10.05□□□□□ -0.8
SEC13-206ENST00000397102 NPVFQ9HCQ7 196 aa10.05□□□□□ -0.8
SEC13-206ENST00000397102 FNDC10F2Z333 226 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 CRYGDP07320 174 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 SRIP30626 198 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 RRAS2P62070 204 aaPredicted RBP10.04□□□□□ -0.8
SEC13-206ENST00000397102 SLC38A11Q08AI6 406 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 FHL2Q14192 279 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 Q8N814 137 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 PSENENQ9NZ42 101 aa10.04□□□□□ -0.8
SEC13-206ENST00000397102 KLLNB2CW77 178 aa10.03□□□□□ -0.8
SEC13-206ENST00000397102 K7EQD1 137 aa10.03□□□□□ -0.8
SEC13-206ENST00000397102 HOXB5P09067 269 aa10.03□□□□□ -0.8
SEC13-206ENST00000397102 ZNF546Q86UE3 836 aa10.03□□□□□ -0.8
SEC13-206ENST00000397102 DIRAS2Q96HU8 199 aa10.03□□□□□ -0.8
SEC13-206ENST00000397102 MRPL32Q9BYC8 188 aaKnown RBP10.03□□□□□ -0.8
SEC13-206ENST00000397102 MRPL16Q9NX20 251 aaKnown RBP10.03□□□□□ -0.8
SEC13-206ENST00000397102 PLA2G2DQ9UNK4 145 aa10.03□□□□□ -0.8
SEC13-206ENST00000397102 H3BQ15 152 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 GOSR2O14653 212 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 MPDU1O75352 247 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 CCNKO75909 580 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 SFT2D2O95562 160 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 POLR2GP62487 172 aaKnown RBP eCLIP10.02□□□□□ -0.81
SEC13-206ENST00000397102 ID3Q02535 119 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 CD300CQ08708 224 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 BTN1A1Q13410 526 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 OPCMLQ14982 345 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 GUK1Q16774 197 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 MORN5Q5VZ52 161 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 MGAT4CQ9UBM8 478 aa10.02□□□□□ -0.81
SEC13-206ENST00000397102 E5RGE8 158 aa10.01□□□□□ -0.81
SEC13-206ENST00000397102 COX7A2P2O60397 106 aa10.01□□□□□ -0.81
SEC13-206ENST00000397102 Q6ZSA8 131 aa10.01□□□□□ -0.81
SEC13-206ENST00000397102 PCNPQ8WW12 178 aaKnown RBP10.01□□□□□ -0.81
SEC13-206ENST00000397102 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
SEC13-206ENST00000397102 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
SEC13-206ENST00000397102 CCDC59Q9P031 241 aaKnown RBP10.01□□□□□ -0.81
SEC13-206ENST00000397102 LRP1Q07954 4544 aaKnown RBP10□□□□□ -0.81
SEC13-206ENST00000397102 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
SEC13-206ENST00000397102 AGPAT2O15120 278 aa10□□□□□ -0.81
SEC13-206ENST00000397102 ZNF253O75346 499 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms