RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 APLNQ9ULZ1 77 aa9.99□□□□□ -0.81
SEC13-204ENST00000397099 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
SEC13-204ENST00000397099 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 IGHV4-4A0A075B6R2 117 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 H0YIZ8 118 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 M0R2Z0 102 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 CRXO43186 299 aaPredicted RBP9.98□□□□□ -0.81
SEC13-204ENST00000397099 IFNA5P01569 189 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 EMP1P54849 157 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 TAS2R60P59551 318 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 CLINT1Q14677 625 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 MORN5Q5VZ52 161 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 ASB13Q8WXK3 278 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 TIMM9Q9Y5J7 89 aa9.98□□□□□ -0.81
SEC13-204ENST00000397099 DNAH6Q9C0G6 4158 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 H3BQ15 152 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 RPL12P30050 165 aaKnown RBP9.97□□□□□ -0.81
SEC13-204ENST00000397099 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 THAP6Q8TBB0 222 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 SCGB1C1Q8TD33 95 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 PARD6GQ9BYG4 376 aaPredicted RBP9.97□□□□□ -0.81
SEC13-204ENST00000397099 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 HSPB11Q9Y547 144 aa9.97□□□□□ -0.81
SEC13-204ENST00000397099 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
SEC13-204ENST00000397099 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 H7BYZ3 331 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 SLC17A3O00476 420 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 P0DMU3 169 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 FAM231AP0DMU4 169 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 FAM231CP0DMU5 169 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 LEPP41159 167 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 BAP18Q8IXM2 172 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 LINC00477Q96M19 166 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 LINC01587Q99440 93 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 ZNF586Q9NXT0 402 aa9.96□□□□□ -0.82
SEC13-204ENST00000397099 BIRC6Q9NR09 4857 aa9.95□□□□□ -0.82
SEC13-204ENST00000397099 TAS2R45P59539 299 aa9.95□□□□□ -0.82
SEC13-204ENST00000397099 DAD1P61803 113 aa9.95□□□□□ -0.82
SEC13-204ENST00000397099 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 NPIPB6E9PJ23 425 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 NMBP08949 121 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 NBEAP1P0C6P0 100 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 CCDC28AQ8IWP9 274 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
SEC13-204ENST00000397099 OR51M1Q9H341 326 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 FUT9Q9Y231 359 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 TIMM8BQ9Y5J9 83 aaPredicted RBP9.94□□□□□ -0.82
SEC13-204ENST00000397099 ALG5Q9Y673 324 aa9.94□□□□□ -0.82
SEC13-204ENST00000397099 ZNF705GA8MUZ8 300 aaPredicted RBP9.93□□□□□ -0.82
SEC13-204ENST00000397099 H3BTX0 84 aa9.93□□□□□ -0.82
SEC13-204ENST00000397099 SNRPCP09234 159 aaKnown RBP9.93□□□□□ -0.82
SEC13-204ENST00000397099 ZNF767PQ75MW2 155 aa9.93□□□□□ -0.82
SEC13-204ENST00000397099 PAXXQ9BUH6 204 aa9.93□□□□□ -0.82
SEC13-204ENST00000397099 SLC25A2Q9BXI2 301 aa9.93□□□□□ -0.82
SEC13-204ENST00000397099 MED28Q9H204 178 aa9.93□□□□□ -0.82
SEC13-204ENST00000397099 NDUFB4O95168 129 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 SLC25A5P05141 298 aaKnown RBP9.92□□□□□ -0.82
SEC13-204ENST00000397099 PYYP10082 97 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 ZNF266Q14584 549 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 KHDC3LQ587J8 217 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 GCSAMLQ5JQS6 135 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 BLNKQ8WV28 456 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 FAM167A-AS1Q96KT0 104 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 PYGO2Q9BRQ0 406 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 FRAS1Q86XX4 4008 aa9.92□□□□□ -0.82
SEC13-204ENST00000397099 TRBV7-9A0A0J9YWB2 115 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 OR7C2O60412 319 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 CT45A10P0DMU9 189 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 CSN1S1P47710 185 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
SEC13-204ENST00000397099 FFAR4Q5NUL3 377 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 GFI1BQ5VTD9 330 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 C9orf47Q6ZRZ4 202 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 RNF141Q8WVD5 230 aa9.91□□□□□ -0.82
SEC13-204ENST00000397099 RBAKDNA6NC62 111 aa9.9□□□□□ -0.82
SEC13-204ENST00000397099 CBY3A6NI87 242 aa9.9□□□□□ -0.82
SEC13-204ENST00000397099 ICAM4Q14773 271 aa9.9□□□□□ -0.82
SEC13-204ENST00000397099 RNASE8Q8TDE3 154 aaKnown RBP9.9□□□□□ -0.82
SEC13-204ENST00000397099 FXYD5Q96DB9 178 aa9.9□□□□□ -0.82
SEC13-204ENST00000397099 M0R3E3 92 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 ATP5G1P05496 136 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 GIPP09681 153 aaPredicted RBP9.89□□□□□ -0.83
SEC13-204ENST00000397099 HTN1P15515 57 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 M6PRP20645 277 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 ATP5G3P48201 142 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 RNF212Q495C1 297 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 FAM74A1Q5RGS3 127 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 PQLC2Q6ZP29 291 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 POM121L12Q8N7R1 296 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 ZNF680Q8NEM1 530 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 RXFP4Q8TDU9 374 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms