RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.86e-12■■□□□ 13.2
GAPDH-204ENST00000396859 CSN1S1P47710 185 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 DEFB1P60022 68 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 HIST1H1AQ02539 215 aaPredicted RBP10.05□□□□□ -0.8
GAPDH-204ENST00000396859 ICAM4Q14773 271 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 ZNF503Q96F45 646 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 CLUHP3Q96NS8 147 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 RCHY1Q96PM5 261 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 TMEM167BQ9NRX6 74 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 U3KQK5 164 aa10.05□□□□□ -0.8
GAPDH-204ENST00000396859 SPRY2O43597 315 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 NDUFB4O95168 129 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 CNN1P51911 297 aaKnown RBP10.04□□□□□ -0.8
GAPDH-204ENST00000396859 RANP62826 216 aaKnown RBP10.04□□□□□ -0.8
GAPDH-204ENST00000396859 DEFB135Q30KP9 77 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 C9orf62Q8N4C0 152 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 TMED6Q8WW62 240 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 PHYHIPLQ96FC7 376 aa10.04□□□□□ -0.8
GAPDH-204ENST00000396859 ZNF705FA8MVS1 300 aaPredicted RBP10.03□□□□□ -0.8
GAPDH-204ENST00000396859 AMBPP02760 352 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 ZNF705DP0CH99 300 aaPredicted RBP10.03□□□□□ -0.8
GAPDH-204ENST00000396859 ZNF705BP0CI00 300 aaPredicted RBP10.03□□□□□ -0.8
GAPDH-204ENST00000396859 GCHFRP30047 84 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 DPPA3Q6W0C5 159 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 FAM213BQ8TBF2 198 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 Q9H3A6 140 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 RETNQ9HD89 108 aa10.03□□□□□ -0.8
GAPDH-204ENST00000396859 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.81
GAPDH-204ENST00000396859 RXFP4Q8TDU9 374 aa10.02□□□□□ -0.81
GAPDH-204ENST00000396859 RNF183Q96D59 192 aa10.02□□□□□ -0.81
GAPDH-204ENST00000396859 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.81
GAPDH-204ENST00000396859 OTORQ9NRC9 128 aa10.02□□□□□ -0.81
GAPDH-204ENST00000396859 PGPA6NDG6 321 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 M0R3E3 92 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 RAB5CP51148 216 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 FXYD7P58549 80 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 ZNF726P1Q15940 193 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 OVOL2Q9BRP0 275 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 XCL2Q9UBD3 114 aa10.01□□□□□ -0.81
GAPDH-204ENST00000396859 A8MTW9 85 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 PRAC2D3DTV9 90 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 TEX46H3BTG2 121 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 BOLA2-SMG1P6H3BVE0 249 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 TSPOP30536 169 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 NKX2-5P52952 324 aaPredicted RBP10□□□□□ -0.81
GAPDH-204ENST00000396859 SFT2D1Q8WV19 159 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 RARRES2Q99969 163 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 AGRNO00468 2067 aa10□□□□□ -0.81
GAPDH-204ENST00000396859 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
GAPDH-204ENST00000396859 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 PRB4P10163 310 aaPredicted RBP9.99□□□□□ -0.81
GAPDH-204ENST00000396859 FHITP49789 147 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 FGF8P55075 233 aaPredicted RBP9.99□□□□□ -0.81
GAPDH-204ENST00000396859 SPINK13Q1W4C9 94 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 TMEM78Q5T7P6 136 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 OR11H2Q8NH07 326 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 SUN5Q8TC36 379 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 LINC00477Q96M19 166 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 RPH3ALQ9UNE2 315 aa9.99□□□□□ -0.81
GAPDH-204ENST00000396859 TGP01266 2768 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 INSP01308 110 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 GIG44P09565 113 aaPredicted RBP9.98□□□□□ -0.81
GAPDH-204ENST00000396859 LEPP41159 167 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 SULT1A2P50226 295 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 AMTNQ6UX39 209 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 ARL6IP6Q8N6S5 226 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 MBD3L1Q8WWY6 194 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
GAPDH-204ENST00000396859 GOLT1BQ9Y3E0 138 aa9.98□□□□□ -0.81
GAPDH-204ENST00000396859 PRKDCP78527 4128 aaKnown RBP9.98□□□□□ -0.81
GAPDH-204ENST00000396859 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
GAPDH-204ENST00000396859 A0A1W2PRE2 83 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 K7EQM0 130 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 M0R2Z0 102 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
GAPDH-204ENST00000396859 CDKN1BP46527 198 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 PPT1P50897 306 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 SUMO1P63165 101 aaKnown RBP9.97□□□□□ -0.81
GAPDH-204ENST00000396859 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 IGF2BP2-AS1Q96M15 143 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 TMEM208Q9BTX3 173 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 TMPRSS5Q9H3S3 457 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
GAPDH-204ENST00000396859 IGHV3OR16-12A0A075B7B8 117 aa9.96□□□□□ -0.82
GAPDH-204ENST00000396859 SERTM2A0A1B0GWG4 89 aa9.96□□□□□ -0.82
GAPDH-204ENST00000396859 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
GAPDH-204ENST00000396859 IFNA7P01567 189 aa9.96□□□□□ -0.82
GAPDH-204ENST00000396859 HBE1P02100 147 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms