RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 SAMD10Q9BYL1 202 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 RNF114Q9Y508 228 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 SPINK4O60575 86 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 CD33P20138 364 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 FCGR2BP31994 310 aaPredicted RBP11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 MYCNOSP40205 109 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 PROK1P58294 105 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 RASL11AQ6T310 242 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 SNHG12Q9BXW3 62 aa11.47□□□□□ -0.57
TM9SF1-202ENST00000396854 IGHV3-21A0A0B4J1V1 117 aa11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 IGHV3-48P01763 117 aa11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 GPX1P07203 203 aa11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 PRIMA1Q86XR5 153 aa11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 KCNS1Q96KK3 526 aa11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 LINC00479Q96M42 142 aa11.46□□□□□ -0.57
TM9SF1-202ENST00000396854 A0A0G2JLM5 398 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 BMPR1BO00238 502 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 TMEM183BQ1AE95 376 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 MRPL54Q6P161 138 aaKnown RBP11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 OR4X2Q8NGF9 303 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 ATP6V0BQ99437 205 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 C21orf62Q9NYP8 219 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 M0R143 59 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 RAB4AP20338 218 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 LINC00305Q7Z4B0 112 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 TXN2Q99757 166 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF586Q9NXT0 402 aa11.45□□□□□ -0.58
TM9SF1-202ENST00000396854 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 RPLP1P05386 114 aaKnown RBP11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 MFAP4P55083 255 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 KIAA1644Q3SXP7 199 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF491Q8N8L2 437 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 SMIM12Q96EX1 92 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 GRAMD2BQ96HH9 432 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 CHRDL1Q9BU40 450 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 S4R3C0 116 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 JMJD1CQ15652 2540 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 APCSP02743 223 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 SRIP30626 198 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 TCTEX1D4Q5JR98 221 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 CCDC140Q96MF4 163 aa11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF331Q9NQX6 463 aaPredicted RBP11.44□□□□□ -0.58
TM9SF1-202ENST00000396854 A0A1W2PS18 150 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF253O75346 499 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 IGLC1P0CG04 106 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 NUDT10Q8NFP7 164 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 NUDT11Q96G61 164 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 UBE2E2Q96LR5 201 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 RCHY1Q96PM5 261 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 MIEN1Q9BRT3 115 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 VAMP8Q9BV40 100 aa11.43□□□□□ -0.58
TM9SF1-202ENST00000396854 TRAV34A0A0B4J273 112 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 HAX1O00165 279 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 PLP1P60201 277 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 Q8N976 141 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 WFDC12Q8WWY7 111 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 EPDR1Q9UM22 224 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 KLF12Q9Y4X4 402 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF324O75467 553 aaPredicted RBP11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 IGHV3-23P01764 117 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 AMTP48728 403 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 KRTAP24-1Q3LI83 254 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 Q56UQ5 140 aa11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 MRPL27Q9P0M9 148 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-202ENST00000396854 GNG7O60262 68 aa11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 HIST1H1EP10412 219 aaKnown RBP11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 SLAQ13239 276 aa11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 OR4B1Q8NGF8 309 aa11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 OR1B1Q8NGR6 318 aa11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 NEU1Q99519 415 aa11.41□□□□□ -0.58
TM9SF1-202ENST00000396854 IGHV3-11P01762 117 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 ORM2P19652 201 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 GPR183P32249 361 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 KRTDAPP60985 99 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 UBE2G1P62253 170 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 GNG5P63218 68 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 CLEC19AQ6UXS0 136 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 TSKUQ8WUA8 353 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 PAM16Q9Y3D7 125 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 DIRC3C9JPN6 131 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 TCAPO15273 167 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 CLEC3BP05452 202 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms