RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CNIH1O95406 144 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 IGLV2-11P01706 119 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 SMIM13P0DJ93 91 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 FXYD2P54710 66 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 LCNL1Q6ZST4 164 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 GTSCR1Q86UQ5 136 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 C1orf162Q8NEQ5 155 aaPredicted RBP7.79□□□□□ -1.16
TRIM39-203ENST00000396547 IGHV3-35A0A0C4DH35 117 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 TMEM189A5PLL7 270 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 IGLV2-23P01705 113 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 COX7A1P24310 79 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 BOD1L2Q8IYS8 172 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 VSTM5A8MXK1 200 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 AZU1P20160 251 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 ORMDL3Q8N138 153 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 TRGV9Q99603 122 aa7.79□□□□□ -1.16
TRIM39-203ENST00000396547 RELNP78509 3460 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 K7EQM0 130 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 NPYP01303 97 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 MRPL51Q4U2R6 128 aaKnown RBP7.78□□□□□ -1.16
TRIM39-203ENST00000396547 RAI1Q7Z5J4 1906 aaPredicted RBP7.78□□□□□ -1.16
TRIM39-203ENST00000396547 Q8TAT8 98 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 IGKV2-40A0A087WW87 121 aaPredicted RBP7.78□□□□□ -1.16
TRIM39-203ENST00000396547 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 NPIPB5A8MRT5 1133 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 NDUFB3O43676 98 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 IGKV2D-40P01614 121 aaPredicted RBP7.78□□□□□ -1.16
TRIM39-203ENST00000396547 IGHV3-23P01764 117 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 HBDP02042 147 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 AMTNQ6UX39 209 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 ADAMTSL5Q6ZMM2 481 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 TMEM75Q8N9X5 138 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 ABCA4P78363 2273 aa7.78□□□□□ -1.16
TRIM39-203ENST00000396547 IL4P05112 153 aa7.77□□□□□ -1.16
TRIM39-203ENST00000396547 SH2D6Q7Z4S9 175 aa7.77□□□□□ -1.16
TRIM39-203ENST00000396547 NGBQ9NPG2 151 aa7.77□□□□□ -1.16
TRIM39-203ENST00000396547 TSSC4Q9Y5U2 329 aaPredicted RBP7.77□□□□□ -1.16
TRIM39-203ENST00000396547 PPIAL4EA0A075B759 164 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 NPIPB6E9PJ23 425 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 NDUFS7O75251 213 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 FCN3O75636 299 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 PPIAL4FP0DN26 164 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-203ENST00000396547 APOBEC3AP31941 199 aaPredicted RBP7.77□□□□□ -1.17
TRIM39-203ENST00000396547 LGALS7P47929 136 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 RBPJQ06330 500 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 WFDC2Q14508 124 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 DEFB109BQ30KR1 87 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 SFTA2Q6UW10 78 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 SEM1Q6ZVN7 128 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 TMEM160Q9NX00 188 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 ORM1P02763 201 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 ODF1Q14990 250 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 ABHD17AQ96GS6 310 aa7.77□□□□□ -1.17
TRIM39-203ENST00000396547 IGHG3P01860 377 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 LEPP41159 167 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 LGALS9BQ3B8N2 356 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 FAM104BQ5XKR9 115 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 LGALS9CQ6DKI2 356 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 OR4X2Q8NGF9 303 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 NBASA2RRP1 2371 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 FOXC2Q99958 501 aa7.76□□□□□ -1.17
TRIM39-203ENST00000396547 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.75□□□□□ -1.17
TRIM39-203ENST00000396547 SH2D1AO60880 128 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 ETDBQ3ZM63 59 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 OR5A1Q8NGJ0 315 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 TRAV17A0A0B4J275 112 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 H3BMG7 143 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 SIGMAR1Q99720 223 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 SPTBN1Q01082 2364 aaKnown RBP7.75□□□□□ -1.17
TRIM39-203ENST00000396547 LYNX1G3V0Z9 82 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 LYNX1P0DP58 116 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 CD40P25942 277 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 HLA-DMBP28068 263 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 ARPC1AQ92747 370 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 CHAC1Q9BUX1 264 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 SIGLEC9Q9Y336 463 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 ARHGAP32A7KAX9 2087 aa7.75□□□□□ -1.17
TRIM39-203ENST00000396547 IGLV3-9A0A075B6K5 115 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 CRYGCP07315 174 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 PPP1R27Q86WC6 154 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 ZNF843Q8N446 348 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 BBC3Q96PG8 261 aaPredicted RBP7.74□□□□□ -1.17
TRIM39-203ENST00000396547 AAMDCQ9H7C9 122 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 AGRNO00468 2067 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 OVOL3O00110 214 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 MC5RP33032 325 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 GATA4P43694 442 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 MRGPRG-AS1Q2M3A8 158 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 SIGLEC15Q6ZMC9 328 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 ITPR1Q14643 2758 aa7.74□□□□□ -1.17
TRIM39-203ENST00000396547 CTSZQ9UBR2 303 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms