RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ATP6V0E1O15342 81 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 PFN1P07737 140 aaKnown RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 HOXA5P20719 270 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 REC114Q7Z4M0 266 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 UQCR10Q9UDW1 63 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 A1L4Q6 167 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 K7EMT4 169 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 FBN2P35556 2912 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 TRGV11A0A075B6L2 103 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 ATP5G3P48201 142 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 LY6EQ16553 131 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF492Q9P255 531 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 KLF12Q9Y4X4 402 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 DMRT1Q9Y5R6 373 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 PROP1O75360 226 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 IGKV1-17P01599 117 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 SRIP30626 198 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 LMO4P61968 165 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 EIF4EBP1Q13541 118 aaPredicted RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 FAM53AQ6NSI3 398 aaPredicted RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 RNASEKQ6P5S7 137 aaKnown RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 IL17RELQ6ZVW7 336 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 WFDC1Q9HC57 220 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 DCAF16Q9NXF7 216 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 LY6HO94772 140 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV3-48P01763 117 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 GPHB5Q86YW7 130 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV3-21A0A0B4J1V1 117 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 C10orf55Q5SWW7 151 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF841Q6ZN19 808 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 RPLP1P05386 114 aaKnown RBP2.69□□□□□ -1.98
VPS13C-203ENST00000395896 PMCHL2Q9BQD1 86 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 INSL3P51460 131 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 MSMPQ1L6U9 139 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 PDZD11Q5EBL8 140 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 C11orf71Q6IPW1 123 aa2.69□□□□□ -1.98
VPS13C-203ENST00000395896 BUB3O43684 328 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 CIDEAO60543 219 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 PRDM13Q9H4Q3 707 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TCL1AP56279 114 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 COA6Q5JTJ3 125 aaKnown RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 C11orf1Q9H5F2 150 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 FNDC4Q9H6D8 234 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV7-81A0A0B4J1V7 117 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 ODF3BA8MYP8 253 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 SPINK4O60575 86 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 LINC00614P0C842 121 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 COTL1Q14019 142 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 MCRIP2Q9BUT9 160 aaKnown RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 RHPN1-AS1Q9BWJ2 59 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 IGKV3-7A0A075B6H7 116 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TRBV6-1A0A0K0K1D8 114 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF324O75467 553 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 WIPF2Q8TF74 440 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 PRR25Q96S07 402 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 GOLT1BQ9Y3E0 138 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TRBV20OR9-2A0A075B6H5 130 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 K7EIM0 57 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 PYYP10082 97 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 CBLN1P23435 193 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 LEPP41159 167 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 HNRNPA3P51991 378 aaKnown RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 Q0VG73 95 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 CIRBPQ14011 172 aaKnown RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 MRPL52Q86TS9 123 aaKnown RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 ZNRD1Q9P1U0 126 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 GATA2P23769 480 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TMEM97Q5BJF2 176 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TCF23Q7RTU1 214 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 RNASE7Q9H1E1 156 aaKnown RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TRAV25A0A0B4J276 109 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 GGTLC3B5MD39 225 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 H3BRN7 92 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 HOXB4P17483 251 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 LCN12Q6JVE5 192 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 SCRT1Q9BWW7 348 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 CD24P25063 80 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 PIP4P2Q8N4L2 257 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 PYGO2Q9BRQ0 406 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 SIRPDQ9H106 197 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 AURKAIP1Q9NWT8 199 aaPredicted RBP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 A6NDN8 102 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 DIRC3C9JPN6 131 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 TCF21O43680 179 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 CXCL1P09341 107 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 CDKN1BP46527 198 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 SSTP61278 116 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 GHRHP01286 108 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 SRSF1Q07955 248 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS13C-203ENST00000395896 C5orf56Q8N8D9 126 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 HBDP02042 147 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 Q8N9W7 124 aa2.68□□□□□ -1.98
VPS13C-203ENST00000395896 HRNRQ86YZ3 2850 aaPredicted RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV4-39P01824 125 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 GRNP28799 593 aaKnown RBP2.67□□□□□ -1.98
VPS13C-203ENST00000395896 SLAQ13239 276 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 LHFPL4Q7Z7J7 247 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 FXYD5Q96DB9 178 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
VPS13C-203ENST00000395896 I3L2K1 104 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms