RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 PRDM6Q9NQX0 595 aa13.74□□□□□ -0.21
SREBF1-203ENST00000395751 SNRPD3P62318 126 aaKnown RBP13.74□□□□□ -0.21
SREBF1-203ENST00000395751 HERV-K104P63124 156 aa13.74□□□□□ -0.21
SREBF1-203ENST00000395751 SMRP1Q8NCR6 262 aa13.74□□□□□ -0.21
SREBF1-203ENST00000395751 IGLV3-19P01714 112 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 HLA-DRB4P13762 266 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 TMEM126AQ9H061 195 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 HLA-DRB4X5D2U9 266 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 SPTBN2O15020 2390 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 PATE3B3GLJ2 98 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 IGKV3D-20A0A0C4DH25 116 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 SHISA9B4DS77 424 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 SHANK2-AS3Q9BTD1 123 aa13.73□□□□□ -0.21
SREBF1-203ENST00000395751 APOBEC3AP31941 199 aaPredicted RBP13.73□□□□□ -0.21
SREBF1-203ENST00000395751 ARHGAP21Q5T5U3 1957 aa13.72□□□□□ -0.21
SREBF1-203ENST00000395751 GTF3C1Q12789 2109 aa13.72□□□□□ -0.21
SREBF1-203ENST00000395751 FXYD5Q96DB9 178 aa13.72□□□□□ -0.21
SREBF1-203ENST00000395751 TOMM7Q9P0U1 55 aa13.72□□□□□ -0.21
SREBF1-203ENST00000395751 ZNF784Q8NCA9 323 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-203ENST00000395751 ZSWIM8A7E2V4 1837 aa13.72□□□□□ -0.21
SREBF1-203ENST00000395751 C14orf178Q8N769 122 aaPredicted RBP13.72□□□□□ -0.21
SREBF1-203ENST00000395751 IGKV3OR2-268A0A0C4DH90 116 aa13.71□□□□□ -0.21
SREBF1-203ENST00000395751 RNF183Q96D59 192 aa13.71□□□□□ -0.21
SREBF1-203ENST00000395751 CACNA1HO95180 2353 aa13.71□□□□□ -0.21
SREBF1-203ENST00000395751 LTBP1Q14766 1721 aa13.71□□□□□ -0.21
SREBF1-203ENST00000395751 A0A087WX48 190 aa13.7□□□□□ -0.22
SREBF1-203ENST00000395751 ANKRD29Q8N6D5 301 aa13.7□□□□□ -0.22
SREBF1-203ENST00000395751 LTAP01374 205 aa13.7□□□□□ -0.22
SREBF1-203ENST00000395751 TRBV19A0A075B6N1 114 aa13.7□□□□□ -0.22
SREBF1-203ENST00000395751 UTF1Q5T230 341 aa13.7□□□□□ -0.22
SREBF1-203ENST00000395751 NDUFA4L2Q9NRX3 87 aa13.7□□□□□ -0.22
SREBF1-203ENST00000395751 CFHR1Q03591 330 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 FAM120AOSQ5T036 256 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 USF3Q68DE3 2245 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 TRGV3P03979 118 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 MORN5Q5VZ52 161 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 TIMM21Q9BVV7 248 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 IGKV1D-17A0A075B6S4 117 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 C17orf100A8MU93 164 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 KLK10O43240 276 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 POU2AF1Q16633 256 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
SREBF1-203ENST00000395751 CLUHP3Q96NS8 147 aa13.69□□□□□ -0.22
SREBF1-203ENST00000395751 ATP6V0E2Q8NHE4 81 aa13.68□□□□□ -0.22
SREBF1-203ENST00000395751 C8orf49Q96NF6 230 aa13.68□□□□□ -0.22
SREBF1-203ENST00000395751 A0A1W2PPI3 338 aa13.68□□□□□ -0.22
SREBF1-203ENST00000395751 OVOL1O14753 267 aa13.68□□□□□ -0.22
SREBF1-203ENST00000395751 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
SREBF1-203ENST00000395751 DYNLRB2Q8TF09 96 aa13.68□□□□□ -0.22
SREBF1-203ENST00000395751 ZNF407Q9C0G0 2248 aa13.67□□□□□ -0.22
SREBF1-203ENST00000395751 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
SREBF1-203ENST00000395751 C20orf78Q9BR46 151 aa13.67□□□□□ -0.22
SREBF1-203ENST00000395751 PINLYPA6NC86 204 aa13.67□□□□□ -0.22
SREBF1-203ENST00000395751 C22orf46C9J442 243 aa13.67□□□□□ -0.22
SREBF1-203ENST00000395751 ZNF474Q6S9Z5 364 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-203ENST00000395751 NEU4Q8WWR8 484 aaPredicted RBP13.67□□□□□ -0.22
SREBF1-203ENST00000395751 IGHG4P01861 327 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 CFC1BP0CG36 223 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 CFC1P0CG37 223 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 EFNA4P52798 201 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 CRPP02741 224 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 DEFB104AQ8WTQ1 72 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 CARD19Q96LW7 228 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 IGF2BP2-AS1Q96M15 143 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 TP53TG3Q9ULZ0 132 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 ZNF876PQ49A33 203 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 TMEM14CQ9P0S9 112 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 PRR25Q96S07 402 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 SPXQ9BT56 116 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 SIGLEC9Q9Y336 463 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 PKDREJQ9NTG1 2253 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 PLXNA4Q9HCM2 1894 aa13.66□□□□□ -0.22
SREBF1-203ENST00000395751 NOTCH3Q9UM47 2321 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 J3KT08 172 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 TP53TG1Q9Y2A0 90 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 IGHV1-18A0A0C4DH31 117 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 B3GALT5-AS1P59052 145 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
SREBF1-203ENST00000395751 SMIM2Q9BVW6 85 aa13.65□□□□□ -0.22
SREBF1-203ENST00000395751 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.23
SREBF1-203ENST00000395751 TMEM141Q96I45 108 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 CADP27708 2225 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 TIMM23O14925 209 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 Q6ZUT4 128 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 DTX2Q86UW9 622 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 GHRHP01286 108 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 LY6G5BQ8NDX9 201 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 RNF5Q99942 180 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 RLFQ13129 1914 aa13.64□□□□□ -0.23
SREBF1-203ENST00000395751 MAFAQ8NHW3 353 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-203ENST00000395751 ARFGEF3Q5TH69 2177 aa13.63□□□□□ -0.23
SREBF1-203ENST00000395751 B9A039 149 aa13.63□□□□□ -0.23
SREBF1-203ENST00000395751 FOXC1Q12948 553 aa13.63□□□□□ -0.23
SREBF1-203ENST00000395751 IGHV3OR16-12A0A075B7B8 117 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms