RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 TRBV19A0A075B6N1 114 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 IGKV2D-26A0A0A0MRZ7 120 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 CRYGCP07315 174 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 PRSS1P07477 247 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 FCER1GP30273 86 aa11.29□□□□□ -0.6
CLIP2-203ENST00000395060 SPTAN1Q13813 2472 aaKnown RBP11.28□□□□□ -0.6
CLIP2-203ENST00000395060 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 FXYD2P54710 66 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 TCF15Q12870 199 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 GTSCR1Q86UQ5 136 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 SMIM12Q96EX1 92 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-203ENST00000395060 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-203ENST00000395060 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-203ENST00000395060 TMEM178BH3BS89 294 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 K7EP34 96 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 SH2D1AO60880 128 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 PAX2Q02962 417 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 PSG3Q16557 428 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
CLIP2-203ENST00000395060 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-203ENST00000395060 MAP1AP78559 2803 aaPredicted RBP11.28□□□□□ -0.6
CLIP2-203ENST00000395060 K7EQM0 130 aa11.27□□□□□ -0.6
CLIP2-203ENST00000395060 ORM1P02763 201 aa11.27□□□□□ -0.6
CLIP2-203ENST00000395060 JKAMPQ9P055 326 aa11.27□□□□□ -0.6
CLIP2-203ENST00000395060 TEX22C9J3V5 150 aa11.27□□□□□ -0.61
CLIP2-203ENST00000395060 HES1Q14469 280 aa11.27□□□□□ -0.61
CLIP2-203ENST00000395060 UFSP1Q6NVU6 142 aa11.27□□□□□ -0.61
CLIP2-203ENST00000395060 TMEM108Q6UXF1 575 aa11.27□□□□□ -0.61
CLIP2-203ENST00000395060 SCNM1Q9BWG6 230 aa11.27□□□□□ -0.61
CLIP2-203ENST00000395060 NCOR1P1Q9H4R4 102 aa11.27□□□□□ -0.61
CLIP2-203ENST00000395060 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
CLIP2-203ENST00000395060 TEX48A0A1B0GUV7 120 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 H3BRM9 83 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 IGHV3-66A0A0C4DH42 116 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 LY6HO94772 140 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 HBDP02042 147 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 APOBEC3AP31941 199 aaPredicted RBP11.26□□□□□ -0.61
CLIP2-203ENST00000395060 MC5RP33032 325 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 SMAGPQ0VAQ4 97 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 RPEQ96AT9 228 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 A0A1W2PPM0 123 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 NDUFS7O75251 213 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 LGALS7P47929 136 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 FAM104BQ5XKR9 115 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 BOD1L2Q8IYS8 172 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
CLIP2-203ENST00000395060 RALYQ9UKM9 306 aaKnown RBP11.26□□□□□ -0.61
CLIP2-203ENST00000395060 COL6A6A6NMZ7 2263 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 G3V4G9 280 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
CLIP2-203ENST00000395060 FABP2P12104 132 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 LEPP41159 167 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 ZNF80P51504 273 aaPredicted RBP11.25□□□□□ -0.61
CLIP2-203ENST00000395060 HSD52Q0P140 79 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 AMTNQ6UX39 209 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
CLIP2-203ENST00000395060 VGLL1Q99990 258 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 TMEM160Q9NX00 188 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 SPTBN4Q9H254 2564 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 PPIAL4CA0A0B4J2A2 164 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 INS-IGF2F8WCM5 200 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 I3L2K1 104 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 SPRY2O43597 315 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 PPIAL4GP0DN37 164 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 ONECUT1Q9UBC0 465 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 CEACAM4O75871 244 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 Q6ZS92 163 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 ZNF491Q8N8L2 437 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 FOXC2Q99958 501 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 NPFFR1Q9GZQ6 430 aa11.24□□□□□ -0.61
CLIP2-203ENST00000395060 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
CLIP2-203ENST00000395060 ERCC8Q13216 396 aa11.23□□□□□ -0.61
CLIP2-203ENST00000395060 J3KRW8 73 aa11.23□□□□□ -0.61
CLIP2-203ENST00000395060 K7EIM0 57 aa11.23□□□□□ -0.61
CLIP2-203ENST00000395060 FAM169BQ8N8A8 192 aa11.23□□□□□ -0.61
CLIP2-203ENST00000395060 AGRNO00468 2067 aa11.23□□□□□ -0.61
CLIP2-203ENST00000395060 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 TIMM23O14925 209 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
CLIP2-203ENST00000395060 TMEM155Q4W5P6 130 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 CLEC2AQ6UVW9 174 aa11.22□□□□□ -0.61
CLIP2-203ENST00000395060 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms