RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SLC25A48Q6ZT89 311 aaKnown RBP4.58□□□□□ -1.68
RFFL-202ENST00000394597 KIR3DL3Q8N743 410 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 FBXL15Q9H469 300 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 KLF12Q9Y4X4 402 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 LAMA3Q16787 3333 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 LINC00473A8K010 186 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 IGKV1-39P01597 117 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 IGKV1D-39P04432 117 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 COX6CP09669 75 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 SAA1P0DJI8 122 aaPredicted RBP4.58□□□□□ -1.68
RFFL-202ENST00000394597 IFITM1P13164 125 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 SSBP2P81877 361 aaPredicted RBP4.58□□□□□ -1.68
RFFL-202ENST00000394597 ECSCRQ19T08 205 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 LINC00305Q7Z4B0 112 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 NPIPB3Q92617 1050 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 PRSS29PA6NIE9 313 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 C2orf70A6NJV1 201 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 ZNF785A8K8V0 405 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 C15orf65H3BRN8 121 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 VDAC2P45880 294 aaPredicted RBP4.58□□□□□ -1.68
RFFL-202ENST00000394597 MEIG1Q5JSS6 88 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 KLF17Q5JT82 389 aaPredicted RBP4.58□□□□□ -1.68
RFFL-202ENST00000394597 C7orf69Q9H7B7 122 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 EPDR1Q9UM22 224 aa4.58□□□□□ -1.68
RFFL-202ENST00000394597 IGHV3OR16-10A0A075B7F0 116 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 TRAV8-4A0A0B4J246 113 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 M0R1W7 72 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 ATP5LO75964 103 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 EVI2AP22794 236 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 PLA2G5P39877 138 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 LEPP41159 167 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 C17orf58Q2M2W7 97 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 SP5Q6BEB4 398 aaPredicted RBP4.57□□□□□ -1.68
RFFL-202ENST00000394597 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 C11orf52Q96A22 123 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 SPAG8Q99932 426 aaPredicted RBP4.57□□□□□ -1.68
RFFL-202ENST00000394597 IFI27L2Q9H2X8 130 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 S100A4P26447 101 aaKnown RBP4.57□□□□□ -1.68
RFFL-202ENST00000394597 SPRNQ5BIV9 151 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 DUX4L9Q6RFH8 374 aaPredicted RBP4.57□□□□□ -1.68
RFFL-202ENST00000394597 ZNF562Q6V9R5 426 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 C11orf1Q9H5F2 150 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 KAAG1Q9UBP8 84 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 D6R8Y8 96 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 IFI27P40305 119 aaPredicted RBP4.57□□□□□ -1.68
RFFL-202ENST00000394597 LINC00205P59089 165 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 KLF5Q13887 457 aaPredicted RBP4.57□□□□□ -1.68
RFFL-202ENST00000394597 MSMPQ1L6U9 139 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 PCP2Q8IVA1 136 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 FMC1Q96HJ9 113 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 C20orf78Q9BR46 151 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 ADAMTS20P59510 1910 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 SIVA1O15304 175 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 MFAP4P55083 255 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 PPP1R27Q86WC6 154 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 CACNG8Q8WXS5 425 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 HIGD1AQ9Y241 93 aa4.57□□□□□ -1.68
RFFL-202ENST00000394597 TIMM23O14925 209 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 NBR2O15453 112 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 LOXP28300 417 aaPredicted RBP4.56□□□□□ -1.68
RFFL-202ENST00000394597 LINC00310P59036 64 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 PRCDQ00LT1 54 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 CRIP3Q6Q6R5 217 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 FOXI2Q6ZQN5 318 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 RNF5Q99942 180 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 EXPH5Q8NEV8 1989 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 ABCA2Q9BZC7 2435 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 IGHV1-3A0A0C4DH29 117 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 OOSP1A8MZH6 123 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 BUB1B-PAK6H3BSN5 160 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 PRSS2P07478 247 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 LY6EQ16553 131 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 C9orf153Q5TBE3 101 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 Q6AWC8 147 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 FAM53AQ6NSI3 398 aaPredicted RBP4.56□□□□□ -1.68
RFFL-202ENST00000394597 VMO1Q7Z5L0 202 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 ODF3L1Q8IXM7 274 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 SLC25A2Q9BXI2 301 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 BPESC1Q9GZL8 116 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 FOXA2Q9Y261 457 aaPredicted RBP4.56□□□□□ -1.68
RFFL-202ENST00000394597 NCOR2Q9Y618 2525 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 LAMA2P24043 3122 aaKnown RBP4.56□□□□□ -1.68
RFFL-202ENST00000394597 NPIPB5A8MRT5 1133 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 GGTLC3B5MD39 225 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 LGALS9BQ3B8N2 356 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 MINOS1Q5TGZ0 78 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 LGALS9CQ6DKI2 356 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 NEGR1Q7Z3B1 354 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 JMJD8Q96S16 334 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 ZNF747Q9BV97 191 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 MINOS1-NBL1R4GNA1 71 aa4.56□□□□□ -1.68
RFFL-202ENST00000394597 NPIPB6E9PJ23 425 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 ZNF688P0C7X2 276 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 FXYD2P54710 66 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 KLRD1Q13241 179 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 LINC01545Q5VT33 79 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 ITLN2Q8WWU7 325 aaPredicted RBP4.55□□□□□ -1.68
RFFL-202ENST00000394597 PSG8Q9UQ74 426 aa4.55□□□□□ -1.68
RFFL-202ENST00000394597 ARFGEF3Q5TH69 2177 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms