RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 J3KRW8 73 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 CT45A10P0DMU9 189 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 ANXA7P20073 488 aaKnown RBP10.49□□□□□ -0.73
CHMP3-202ENST00000393773 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 PXDC1Q5TGL8 231 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 TEPPQ6URK8 271 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 ZNF546Q86UE3 836 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 TOMM5Q8N4H5 51 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 RAB2BQ8WUD1 216 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 PYGO2Q9BRQ0 406 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 MRPS26Q9BYN8 205 aaKnown RBP10.49□□□□□ -0.73
CHMP3-202ENST00000393773 PTTG2Q9NZH5 202 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 RNF24Q9Y225 148 aa10.49□□□□□ -0.73
CHMP3-202ENST00000393773 NXPH4O95158 308 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 METTL15P1P0C7V9 234 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 LEPP41159 167 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 AP3S2P59780 193 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 BPIFA4PQ86YQ2 179 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 MCFD2Q8NI22 146 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
CHMP3-202ENST00000393773 FRZBQ92765 325 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 NPVFQ9HCQ7 196 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 PXMP4Q9Y6I8 212 aa10.48□□□□□ -0.73
CHMP3-202ENST00000393773 H3BQ15 152 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 EREGO14944 169 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 OPCMLQ14982 345 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 C4orf46Q504U0 113 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 ZNF680Q8NEM1 530 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 TMEM37Q8WXS4 190 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 SAT2Q96F10 170 aaPredicted RBP10.47□□□□□ -0.73
CHMP3-202ENST00000393773 BCL7BQ9BQE9 202 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 MGAT4CQ9UBM8 478 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 V9GYH0 126 aa10.47□□□□□ -0.73
CHMP3-202ENST00000393773 TRGV2A0A075B6R0 118 aa10.46□□□□□ -0.73
CHMP3-202ENST00000393773 A0A087WTM6 91 aa10.46□□□□□ -0.73
CHMP3-202ENST00000393773 AGPAT2O15120 278 aa10.46□□□□□ -0.73
CHMP3-202ENST00000393773 UBE2MP61081 183 aaKnown RBP10.46□□□□□ -0.73
CHMP3-202ENST00000393773 ARL16Q0P5N6 197 aa10.46□□□□□ -0.73
CHMP3-202ENST00000393773 GSN-AS1Q9NRJ2 163 aa10.46□□□□□ -0.73
CHMP3-202ENST00000393773 FUT9Q9Y231 359 aa10.46□□□□□ -0.73
CHMP3-202ENST00000393773 C9orf170A2RU37 121 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 GOSR2O14653 212 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 COX7A2P2O60397 106 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 TMBIM6P55061 237 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 OR10P1Q8NGE3 313 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 DEDD2Q8WXF8 326 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 MGST2Q99735 147 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 LINC00467Q9BRT7 94 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 RCL1Q9Y2P8 373 aaKnown RBP10.45□□□□□ -0.74
CHMP3-202ENST00000393773 ICOSQ9Y6W8 199 aa10.45□□□□□ -0.74
CHMP3-202ENST00000393773 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 C7orf71A4D174 169 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 KLLNB2CW77 178 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 SPINK4O60575 86 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 TSC22D2O75157 780 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 SLC25A5P05141 298 aaKnown RBP10.44□□□□□ -0.74
CHMP3-202ENST00000393773 ICAM4Q14773 271 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 PYDC2Q56P42 97 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
CHMP3-202ENST00000393773 H3BMQ9 156 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
CHMP3-202ENST00000393773 TCL1AP56279 114 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 TAS2R30P59541 319 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 BTN1A1Q13410 526 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 NFE4Q86UQ8 179 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 ST6GAL2Q96JF0 529 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 KLF12Q9Y4X4 402 aa10.43□□□□□ -0.74
CHMP3-202ENST00000393773 PAX4O43316 350 aa10.42□□□□□ -0.74
CHMP3-202ENST00000393773 ZNF253O75346 499 aa10.42□□□□□ -0.74
CHMP3-202ENST00000393773 SCGB1D2O95969 90 aa10.42□□□□□ -0.74
CHMP3-202ENST00000393773 CD300CQ08708 224 aa10.42□□□□□ -0.74
CHMP3-202ENST00000393773 GUK1Q16774 197 aa10.42□□□□□ -0.74
CHMP3-202ENST00000393773 EIF4E3Q8N5X7 224 aaKnown RBP10.42□□□□□ -0.74
CHMP3-202ENST00000393773 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
CHMP3-202ENST00000393773 GGACTQ9BVM4 153 aa10.42□□□□□ -0.74
CHMP3-202ENST00000393773 TRAV5A0A0B4J249 113 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 M0R3E3 92 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 IFNA5P01569 189 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 SMR3BP02814 79 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-202ENST00000393773 OR4E1P0C645 316 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 ERCC8Q13216 396 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 IBA57Q5T440 356 aaKnown RBP10.41□□□□□ -0.74
CHMP3-202ENST00000393773 LYPD5Q6UWN5 251 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 VGLL1Q99990 258 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 MRPL16Q9NX20 251 aaKnown RBP10.41□□□□□ -0.74
CHMP3-202ENST00000393773 MDFICQ9P1T7 246 aa10.41□□□□□ -0.74
CHMP3-202ENST00000393773 HMCN2Q8NDA2 5059 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 IGHV3-53P01767 116 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 CRYBA4P53673 196 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 HAMPP81172 84 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 IAH1Q2TAA2 248 aaPredicted RBP10.4□□□□□ -0.74
CHMP3-202ENST00000393773 PRR9Q5T870 116 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 WFDC10BQ8IUB3 73 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 PRO0255Q9UI72 69 aa10.4□□□□□ -0.74
CHMP3-202ENST00000393773 TRBV19A0A075B6N1 114 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms