RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 CHEK1O14757 476 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
MBD4-202ENST00000393278 ERVFC1-1P60608 527 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 PSG3Q16557 428 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 IGFL4Q6B9Z1 124 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 TGIF2-C20orf24A0A0A6YYL0 155 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 TMEM213A2RRL7 107 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 CXCL1P09341 107 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 RAB5AP20339 215 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 S100PP25815 95 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 FLI1Q01543 452 aaPredicted RBP13.31□□□□□ -0.28
MBD4-202ENST00000393278 WFDC12Q8WWY7 111 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 IMMP2LQ96T52 175 aa13.31□□□□□ -0.28
MBD4-202ENST00000393278 TRAV8-2A0A0B4J237 113 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 NDUFA7O95182 113 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 EDN2P20800 178 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 SYNJ2BPP57105 145 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 C1QL4Q86Z23 238 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 RNASE7Q9H1E1 156 aaKnown RBP13.3□□□□□ -0.28
MBD4-202ENST00000393278 PSG8Q9UQ74 426 aa13.3□□□□□ -0.28
MBD4-202ENST00000393278 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
MBD4-202ENST00000393278 FOLR2P14207 255 aa13.29□□□□□ -0.28
MBD4-202ENST00000393278 BMI1P35226 326 aa13.29□□□□□ -0.28
MBD4-202ENST00000393278 IBA57Q5T440 356 aaKnown RBP13.29□□□□□ -0.28
MBD4-202ENST00000393278 FAM231DQ6ZW35 169 aa13.29□□□□□ -0.28
MBD4-202ENST00000393278 TMEM183AQ8IXX5 376 aa13.29□□□□□ -0.28
MBD4-202ENST00000393278 MRPL53Q96EL3 112 aaKnown RBP13.29□□□□□ -0.28
MBD4-202ENST00000393278 V9GYV3 84 aa13.29□□□□□ -0.28
MBD4-202ENST00000393278 IGKV2-40A0A087WW87 121 aaPredicted RBP13.28□□□□□ -0.28
MBD4-202ENST00000393278 ZNF705FA8MVS1 300 aaPredicted RBP13.28□□□□□ -0.28
MBD4-202ENST00000393278 LINC01619G3V211 115 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 IGKV2D-40P01614 121 aaPredicted RBP13.28□□□□□ -0.28
MBD4-202ENST00000393278 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
MBD4-202ENST00000393278 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
MBD4-202ENST00000393278 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 KCNIP4Q6PIL6 250 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 KLHL30-AS1Q8NEE0 82 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 PYGO2Q9BRQ0 406 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 CLEC5AQ9NY25 188 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 ZFP30Q9Y2G7 519 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 SOCS3O14543 225 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 C16orf92Q96LL3 132 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 NRN1Q9NPD7 142 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 BIN3Q9NQY0 253 aa13.28□□□□□ -0.28
MBD4-202ENST00000393278 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
MBD4-202ENST00000393278 FOXL1Q12952 345 aa13.27□□□□□ -0.29
MBD4-202ENST00000393278 PRR27Q6MZM9 219 aa13.27□□□□□ -0.29
MBD4-202ENST00000393278 OR11H1Q8NG94 326 aa13.27□□□□□ -0.29
MBD4-202ENST00000393278 FAM210BQ96KR6 192 aa13.27□□□□□ -0.29
MBD4-202ENST00000393278 IL36BQ9NZH7 164 aa13.27□□□□□ -0.29
MBD4-202ENST00000393278 TCF21O43680 179 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 CD28P10747 220 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 SLURP1P55000 103 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 TCF24Q7RTU0 167 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 DPF1Q92782 380 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 HIVEP1P15822 2718 aa13.26□□□□□ -0.29
MBD4-202ENST00000393278 NF1P21359 2839 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 PRAC2D3DTV9 90 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 FAM3BP58499 235 aaPredicted RBP13.25□□□□□ -0.29
MBD4-202ENST00000393278 RPL11P62913 178 aaKnown RBP13.25□□□□□ -0.29
MBD4-202ENST00000393278 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 MLXQ9UH92 298 aa13.25□□□□□ -0.29
MBD4-202ENST00000393278 C2orf70A6NJV1 201 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 ZNF705GA8MUZ8 300 aaPredicted RBP13.24□□□□□ -0.29
MBD4-202ENST00000393278 CRLF1O75462 422 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 HIST2H2BDQ6DRA6 164 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 LINC00322Q6ZN03 302 aaPredicted RBP13.24□□□□□ -0.29
MBD4-202ENST00000393278 VGLL1Q99990 258 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 C19orf71A6NCJ1 209 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 GATCO43716 136 aaKnown RBP13.24□□□□□ -0.29
MBD4-202ENST00000393278 CBLN1P23435 193 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 RPS10P46783 165 aaKnown RBP13.24□□□□□ -0.29
MBD4-202ENST00000393278 C11orf44Q8N8P7 122 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 C20orf173Q96LM9 149 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 DUX3Q96PT4 197 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 RNF114Q9Y508 228 aa13.24□□□□□ -0.29
MBD4-202ENST00000393278 HAX1O00165 279 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 PROK1P58294 105 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 COX8CQ7Z4L0 72 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 ZC2HC1AQ96GY0 325 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 ASCL2Q99929 193 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
MBD4-202ENST00000393278 SELENOKQ9Y6D0 94 aa13.23□□□□□ -0.29
MBD4-202ENST00000393278 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
MBD4-202ENST00000393278 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
MBD4-202ENST00000393278 BTF3L4Q96K17 158 aa13.22□□□□□ -0.29
MBD4-202ENST00000393278 PRR25Q96S07 402 aa13.22□□□□□ -0.29
MBD4-202ENST00000393278 CITED2Q99967 270 aaPredicted RBP13.22□□□□□ -0.29
MBD4-202ENST00000393278 TRAV9-1A0A075B6T8 112 aa13.21□□□□□ -0.29
MBD4-202ENST00000393278 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms