RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 CR1P17927 2039 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 IGHV3OR16-8A0A075B7F1 116 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 IGLV1-40P01703 118 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 FRMD6-AS1P0C7T7 363 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 FABP4P15090 132 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 CIARTQ8N365 385 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-202ENST00000392597 MAPK1IP1LQ8NDC0 245 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 OR10D4PQ8NGN7 298 aa15.48■□□□□ 0.07
PTPN11-202ENST00000392597 HIGD1CA8MV81 97 aa15.47■□□□□ 0.07
PTPN11-202ENST00000392597 ARL3P36405 182 aa15.47■□□□□ 0.07
PTPN11-202ENST00000392597 SLC35B1P78383 322 aa15.47■□□□□ 0.07
PTPN11-202ENST00000392597 CFHR3Q02985 330 aa15.47■□□□□ 0.07
PTPN11-202ENST00000392597 MRPL54Q6P161 138 aaKnown RBP15.47■□□□□ 0.07
PTPN11-202ENST00000392597 C16orf54Q6UWD8 224 aa15.47■□□□□ 0.07
PTPN11-202ENST00000392597 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.46■□□□□ 0.07
PTPN11-202ENST00000392597 SPINK4O60575 86 aa15.46■□□□□ 0.07
PTPN11-202ENST00000392597 IGHV4-59P01825 116 aa15.46■□□□□ 0.07
PTPN11-202ENST00000392597 SLC50A1Q9BRV3 221 aa15.46■□□□□ 0.07
PTPN11-202ENST00000392597 A0A0G2JLM5 398 aa15.46■□□□□ 0.06
PTPN11-202ENST00000392597 ZNF785A8K8V0 405 aa15.46■□□□□ 0.06
PTPN11-202ENST00000392597 COX8CQ7Z4L0 72 aa15.46■□□□□ 0.06
PTPN11-202ENST00000392597 ZC2HC1AQ96GY0 325 aa15.46■□□□□ 0.06
PTPN11-202ENST00000392597 PACRGQ96M98 296 aaPredicted RBP15.46■□□□□ 0.06
PTPN11-202ENST00000392597 OTOGQ6ZRI0 2925 aa15.45■□□□□ 0.06
PTPN11-202ENST00000392597 NDUFA4O00483 81 aa15.45■□□□□ 0.06
PTPN11-202ENST00000392597 AMBPP02760 352 aa15.45■□□□□ 0.06
PTPN11-202ENST00000392597 Q6ZS46 218 aa15.45■□□□□ 0.06
PTPN11-202ENST00000392597 CRISP2P16562 243 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 TEX15Q9BXT5 2789 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 ZANQ9Y493 2812 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 CHEK1O14757 476 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 IGHG4P01861 327 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 PF4V1P10720 104 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 RAB4BP61018 213 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 SAPCD1Q5SSQ6 148 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.44■□□□□ 0.06
PTPN11-202ENST00000392597 ZFHX3Q15911 3703 aa15.43■□□□□ 0.06
PTPN11-202ENST00000392597 FLNAP21333 2647 aaKnown RBP15.43■□□□□ 0.06
PTPN11-202ENST00000392597 A0A1B0GXF2 115 aa15.43■□□□□ 0.06
PTPN11-202ENST00000392597 Q0VG73 95 aa15.43■□□□□ 0.06
PTPN11-202ENST00000392597 PYY3Q5JQD4 70 aa15.43■□□□□ 0.06
PTPN11-202ENST00000392597 RBPMS2Q6ZRY4 209 aaKnown RBP15.43■□□□□ 0.06
PTPN11-202ENST00000392597 TMEM18Q96B42 140 aa15.43■□□□□ 0.06
PTPN11-202ENST00000392597 CT45A10P0DMU9 189 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 FAM209BQ5JX69 171 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 GTSF1Q8WW33 167 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 KLK15Q9H2R5 256 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 TMEM89A2RUT3 159 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 DNLZQ5SXM8 178 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 LCN12Q6JVE5 192 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 Q6YL49 198 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 OR2D3Q8NGH3 330 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 MRPL53Q96EL3 112 aaKnown RBP15.42■□□□□ 0.06
PTPN11-202ENST00000392597 NIT2Q9NQR4 276 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 VPREB3Q9UKI3 123 aa15.42■□□□□ 0.06
PTPN11-202ENST00000392597 IGKV2-40A0A087WW87 121 aaPredicted RBP15.41■□□□□ 0.06
PTPN11-202ENST00000392597 RBAKDNA6NC62 111 aa15.41■□□□□ 0.06
PTPN11-202ENST00000392597 IGKV2D-40P01614 121 aaPredicted RBP15.41■□□□□ 0.06
PTPN11-202ENST00000392597 APCSP02743 223 aa15.41■□□□□ 0.06
PTPN11-202ENST00000392597 APOHP02749 345 aaPredicted RBP15.41■□□□□ 0.06
PTPN11-202ENST00000392597 FOXA3P55318 350 aaPredicted RBP15.41■□□□□ 0.06
PTPN11-202ENST00000392597 TCF24Q7RTU0 167 aa15.41■□□□□ 0.06
PTPN11-202ENST00000392597 TRBV12-3P01733 135 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 ESDP10768 282 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 S100A12P80511 92 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 CYB5R2Q6BCY4 276 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 Q71RC1 249 aaPredicted RBP15.4■□□□□ 0.06
PTPN11-202ENST00000392597 OR4X2Q8NGF9 303 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 PRDM13Q9H4Q3 707 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 CLEC5AQ9NY25 188 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 GRIFINA4D1Z8 144 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 ZNF207O43670 478 aaKnown RBP15.4■□□□□ 0.06
PTPN11-202ENST00000392597 HBBP68871 147 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 OR10J3Q5JRS4 329 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 TMEM256Q8N2U0 113 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 GLMPQ8WWB7 406 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 PRR25Q96S07 402 aa15.4■□□□□ 0.06
PTPN11-202ENST00000392597 IGHV3-66A0A0C4DH42 116 aa15.39■□□□□ 0.05
PTPN11-202ENST00000392597 CYSRT1A8MQ03 144 aa15.39■□□□□ 0.05
PTPN11-202ENST00000392597 CRIP1P50238 77 aa15.39■□□□□ 0.05
PTPN11-202ENST00000392597 PSMB8P28062 276 aa15.38■□□□□ 0.05
PTPN11-202ENST00000392597 C8orf49Q96NF6 230 aa15.38■□□□□ 0.05
PTPN11-202ENST00000392597 TP53TG3Q9ULZ0 132 aa15.38■□□□□ 0.05
PTPN11-202ENST00000392597 IGHV3-11P01762 117 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 HLA-DMBP28068 263 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 SLAQ13239 276 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 FAM162BQ5T6X4 162 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 GDF5OSQ5U4N7 250 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 Q6AWC8 147 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 IGFL4Q6B9Z1 124 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 PGLYRP4Q96LB8 373 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 IGHV3OR16-13A0A075B7E8 117 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 IGHV3-74A0A0B4J1X5 117 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 A0A1B0GUS0 222 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 PCP4L1A6NKN8 68 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 UNQ9165/PRO28630Q6UXU0 137 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 C8orf86Q6ZUL3 223 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 VGLL1Q99990 258 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 NPFFR1Q9GZQ6 430 aa15.37■□□□□ 0.05
PTPN11-202ENST00000392597 IGHV3-49A0A0A0MS15 119 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms