RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PIGPP57054 158 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 OR10A3P58181 314 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 UBE2KP61086 200 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 RHOBP62745 196 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H3AP68431 136 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 MYL5Q02045 173 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 AESQ08117 197 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 FABP9Q0Z7S8 132 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 FADDQ13158 208 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CBX3Q13185 183 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ITGB3BPQ13352 177 aaPredicted RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 GPM6BQ13491 265 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 JOSD1Q15040 202 aaPredicted RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SYCP1Q15431 976 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 TRAM1Q15629 374 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 RHOHQ15669 191 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 RAB11BQ15907 218 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SSX2Q16385 188 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ATP6V1FQ16864 119 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 IMPG1Q17R60 797 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 EXOC3L4Q17RC7 722 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 BEX5Q5H9J7 111 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST2H3PS2Q5TEC6 136 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 LRRN1Q6UXK5 716 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST2H3AQ71DI3 136 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 FAM122BQ7Z309 247 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CCDC91Q7Z6B0 441 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 PDZD9Q8IXQ8 264 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 HDDC3Q8N4P3 179 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SPERTQ8NA61 448 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SPC24Q8NBT2 197 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CCDC148Q8NFR7 591 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 OR4B1Q8NGF8 309 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 OR5D16Q8NGK9 328 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 OR2AE1Q8NHA4 323 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 HAVCR2Q8TDQ0 301 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CA5BP1Q8WTZ4 195 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 POP5Q969H6 163 aaKnown RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ISOC2Q96AB3 205 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CHCHD1Q96BP2 118 aaKnown RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 MRAP2Q96G30 205 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ANKRD36BP1Q96IX9 119 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 KCTD7Q96MP8 289 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 PANX1Q96RD7 426 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 BPIFA3Q9BQP9 254 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ERP44Q9BS26 406 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CENPOQ9BU64 300 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 C20orf24Q9BUV8 137 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 BEX2Q9BXY8 128 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 MAF1Q9H063 256 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 ENY2Q9NPA8 101 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 CHRAC1Q9NRG0 131 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SPANXB1Q9NS25 103 aaPredicted RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 C19orf12Q9NSK7 152 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 PARVAQ9NVD7 372 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 MRPL22Q9NWU5 206 aaKnown RBP-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 SDHAF2Q9NX18 166 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 TAS2R13Q9NYV9 303 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 COMMD9Q9P000 198 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 HDGFL3Q9Y3E1 203 aa-0.93□□□□□ -2.56
TRAJ28-201ENST00000390509 VPS13CQ709C8 3753 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 SIP14410 1827 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 ZMYM4Q5VZL5 1548 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 WDFY3Q8IZQ1 3526 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 PCF11O94913 1555 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TRAV1-2A0A0B4J238 106 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 A0A0J9YY10 115 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TRBV10-1A0A0K0K1A3 114 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 A0A1B0GX78 115 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 TCRBV3S1A0A5B6 114 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 DISC1C4P0D8 188 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 F8VRH5 84 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CDIPTO14735 213 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 LSM1O15116 133 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 NDUFB3O43676 98 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 ENSAO43768 121 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 GMFGO60234 142 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 OR2H2O95918 312 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 IGKCP01834 107 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 FTH1P02794 183 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 ISG15P05161 165 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RBP1P09455 135 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 SMIM6P0DI80 62 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 PIPP12273 146 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CCL3L1P16619 93 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CFL1P23528 166 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 DDTP30046 118 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CMPK1P30085 196 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 KDELR2P33947 212 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RABIFP47224 123 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 CDC42P60953 191 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RPS29P62273 56 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RPS24P62847 133 aaKnown RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 UBE2BP63146 152 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 RAD51Q06609 339 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST3H3Q16695 136 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 GUK1Q16774 197 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 IAH1Q2TAA2 248 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 HLA-DRB5Q30154 266 aa-0.94□□□□□ -2.56
TRAJ28-201ENST00000390509 VMA21Q3ZAQ7 101 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms