RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 G3V4G9 280 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 H3BMG7 143 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 TIMM23O14925 209 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 MGPP08493 103 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 NDUFA4L2Q9NRX3 87 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 A0A1W2PPM0 123 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 H3BRM9 83 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 CD3EP07766 207 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
TUSC3-201ENST00000382020 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 FOXC2Q99958 501 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 CENPEQ02224 2701 aa11.89□□□□□ -0.51
TUSC3-201ENST00000382020 ABCA2Q9BZC7 2435 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 GAGE12HA6NDE8 117 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 FAM90A9PA6NNJ1 464 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
TUSC3-201ENST00000382020 FAM106CPP0CH98 169 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 WFDC2Q14508 124 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 FAM106AQ4KMX7 169 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 GTSF1Q8WW33 167 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 NPFFR1Q9GZQ6 430 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 POLQO75417 2590 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 C22orf46C9J442 243 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 ATP5G2Q06055 141 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 SPANXN1Q5VSR9 72 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 SCGB1D4Q6XE38 83 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 ZNF479Q96JC4 524 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 UBTD1Q9HAC8 227 aa11.88□□□□□ -0.51
TUSC3-201ENST00000382020 HLA-DMBP28068 263 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 ATP5L2Q7Z4Y8 100 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 H7C2G1 150 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 ADIPOQQ15848 244 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 TMEM249Q2WGJ8 235 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 PRR30Q53SZ7 412 aaPredicted RBP11.87□□□□□ -0.51
TUSC3-201ENST00000382020 DDB2Q92466 427 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 F5H697 171 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 RNF125Q96EQ8 232 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 ABHD17AQ96GS6 310 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 FMC1Q96HJ9 113 aa11.87□□□□□ -0.51
TUSC3-201ENST00000382020 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 RASL11AQ6T310 242 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 DKK2Q9UBU2 259 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 M0R381 172 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 NDUFA3O95167 84 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 SRSF9Q13242 221 aaKnown RBP eCLIP11.86□□□□□ -0.51
TUSC3-201ENST00000382020 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 GLMPQ8WWB7 406 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 TIMD4Q96H15 378 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 DKK4Q9UBT3 224 aa11.86□□□□□ -0.51
TUSC3-201ENST00000382020 VWC2LB2RUY7 222 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 PRSS46E5RG02 174 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 LGALS7P47929 136 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
TUSC3-201ENST00000382020 TMEM167AQ8TBQ9 72 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
TUSC3-201ENST00000382020 EIF4EBP1Q13541 118 aaPredicted RBP11.85□□□□□ -0.51
TUSC3-201ENST00000382020 KLF5Q13887 457 aaPredicted RBP11.85□□□□□ -0.51
TUSC3-201ENST00000382020 ANXA2RQ3ZCQ2 193 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 ZNF747Q9BV97 191 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 TM4SF5O14894 197 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 SCGB2A1O75556 95 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 IGHV1-8P0DP01 117 aa11.85□□□□□ -0.51
TUSC3-201ENST00000382020 LEPP41159 167 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 Q86TA4 180 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 OR4X2Q8NGF9 303 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
TUSC3-201ENST00000382020 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 RNASE6Q93091 150 aaKnown RBP11.84□□□□□ -0.51
TUSC3-201ENST00000382020 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
TUSC3-201ENST00000382020 APOMO95445 188 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 FXYD2P54710 66 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 ERCC8Q13216 396 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 FAM215AQ9Y5M1 114 aa11.84□□□□□ -0.51
TUSC3-201ENST00000382020 HBDP02042 147 aa11.83□□□□□ -0.51
TUSC3-201ENST00000382020 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.51
TUSC3-201ENST00000382020 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.51
TUSC3-201ENST00000382020 TMEM178BH3BS89 294 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 OR5AN1Q8NGI8 311 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.83□□□□□ -0.52
TUSC3-201ENST00000382020 GATA1P15976 413 aaPredicted RBP11.83□□□□□ -0.52
TUSC3-201ENST00000382020 EMP1P54849 157 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 GAGE13Q4V321 117 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 SEM1Q6ZVN7 128 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 CTSZQ9UBR2 303 aa11.83□□□□□ -0.52
TUSC3-201ENST00000382020 IGHG3P01860 377 aa11.82□□□□□ -0.52
TUSC3-201ENST00000382020 RPL7P18124 248 aaKnown RBP11.82□□□□□ -0.52
TUSC3-201ENST00000382020 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms