RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 MS4A6AQ9H2W1 248 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 V9GYV3 84 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 TLN2Q9Y4G6 2542 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 C2orf88Q9BSF0 95 aa13.77□□□□□ -0.21
SGCB-201ENST00000381431 SPRNQ5BIV9 151 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 IGFL3Q6UXB1 125 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
SGCB-201ENST00000381431 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 K7EM74 188 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 TRAV12-3A0A0B4J271 114 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 RNF182Q8N6D2 247 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 STPG4Q8N801 248 aa13.76□□□□□ -0.21
SGCB-201ENST00000381431 IGHV2-70P01814 119 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 BCL6BQ8N143 479 aaPredicted RBP13.75□□□□□ -0.21
SGCB-201ENST00000381431 SLC25A2Q9BXI2 301 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 SETD2Q9BYW2 2564 aaPredicted RBP13.75□□□□□ -0.21
SGCB-201ENST00000381431 LAGE3Q14657 143 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 Q6ZWC4 215 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 TMEM158Q8WZ71 300 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 TMEM8BA6NDV4 472 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 SNHG12Q9BXW3 62 aa13.75□□□□□ -0.21
SGCB-201ENST00000381431 HSD52Q0P140 79 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 CDPF1Q6NVV7 123 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 C9orf139Q6ZV77 190 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 K7ENP7 123 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 YPEL3P61236 119 aaPredicted RBP13.74□□□□□ -0.21
SGCB-201ENST00000381431 OVOL3O00110 214 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 ATP6V0E1O15342 81 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 SEC11AP67812 179 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 NUP210Q8TEM1 1887 aaPredicted RBP13.74□□□□□ -0.21
SGCB-201ENST00000381431 PRR20EP86478 221 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 PRR20CP86479 221 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 PRR20DP86480 221 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 PRR20BP86481 221 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 PRR20AP86496 221 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 SAMD13Q5VXD3 122 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 NCOR1P1Q9H4R4 102 aa13.74□□□□□ -0.21
SGCB-201ENST00000381431 DUSP14O95147 198 aaKnown RBP13.73□□□□□ -0.21
SGCB-201ENST00000381431 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 TRAV2A0A0B4J234 112 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 RUSC1-AS1Q66K80 236 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 ZNF479Q96JC4 524 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 WISP2O76076 250 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 TEX36Q5VZQ5 186 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 C8orf49Q96NF6 230 aa13.73□□□□□ -0.21
SGCB-201ENST00000381431 DNAL4O96015 105 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 SSBP2P81877 361 aaPredicted RBP13.72□□□□□ -0.21
SGCB-201ENST00000381431 IGFBPL1Q8WX77 278 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 PEMTQ9UBM1 199 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 ZNF876PQ49A33 203 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 TRBV7-1A0A0A6YYK4 115 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 TMEM101Q96IK0 257 aa13.72□□□□□ -0.21
SGCB-201ENST00000381431 DOPEY1Q5JWR5 2465 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 B4DSR2 109 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 TDGF1P3P51864 188 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 Q6ZSR3 168 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 STHQ8IWL8 128 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 HTN3P15516 51 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 OR9G4Q8NGQ1 327 aa13.71□□□□□ -0.21
SGCB-201ENST00000381431 PDE6HQ13956 83 aa13.71□□□□□ -0.22
SGCB-201ENST00000381431 CD28P10747 220 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 SAMD5Q5TGI4 173 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 C11orf52Q96A22 123 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 C20orf144Q9BQM9 153 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 CTSZQ9UBR2 303 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 A0A087WWL8 130 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 TTC32Q5I0X7 151 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 MAPK1IP1LQ8NDC0 245 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 DKK4Q9UBT3 224 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 NDUFS7O75251 213 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 POU2AF1Q16633 256 aa13.7□□□□□ -0.22
SGCB-201ENST00000381431 H3BRM9 83 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 LINC00311Q8N616 119 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 A0A1W2PNU3 283 aaPredicted RBP13.69□□□□□ -0.22
SGCB-201ENST00000381431 K7EN84 100 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 HOXA3O43365 443 aaPredicted RBP13.69□□□□□ -0.22
SGCB-201ENST00000381431 RIPPLY3P57055 190 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 C3orf36Q3SXR2 165 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 LINC00477Q96M19 166 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 MSRB2Q9Y3D2 182 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 DPH3P1Q9H4G8 78 aa13.69□□□□□ -0.22
SGCB-201ENST00000381431 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
SGCB-201ENST00000381431 FXYD5Q96DB9 178 aa13.68□□□□□ -0.22
SGCB-201ENST00000381431 RCHY1Q96PM5 261 aa13.68□□□□□ -0.22
SGCB-201ENST00000381431 SRSF8Q9BRL6 282 aaKnown RBP13.68□□□□□ -0.22
SGCB-201ENST00000381431 TNFRSF6BO95407 300 aa13.68□□□□□ -0.22
SGCB-201ENST00000381431 GRNP28799 593 aaKnown RBP13.68□□□□□ -0.22
SGCB-201ENST00000381431 SMPXQ9UHP9 88 aa13.68□□□□□ -0.22
SGCB-201ENST00000381431 ZNF492Q9P255 531 aa13.68□□□□□ -0.22
SGCB-201ENST00000381431 SCGB1A1P11684 91 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 CSTL1Q9H114 145 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 C17orf77Q96MU5 243 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 C22orf46C9J442 243 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 IGLC2P0DOY2 106 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms