RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 THAP6Q8TBB0 222 aa11.19□□□□□ -0.62
VCX3A-201ENST00000381089 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
VCX3A-201ENST00000381089 SCRT2Q9NQ03 307 aa11.19□□□□□ -0.62
VCX3A-201ENST00000381089 LYRM2Q9NU23 88 aaPredicted RBP11.19□□□□□ -0.62
VCX3A-201ENST00000381089 PMS2P5A8MQ11 134 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 HTN1P15515 57 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 AZU1P20160 251 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-201ENST00000381089 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 TMEM144Q7Z5S9 345 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 STX12Q86Y82 276 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 TMEM252Q8N6L7 170 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 LRRC20Q8TCA0 184 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 ASB13Q8WXK3 278 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 SLC25A39Q9BZJ4 359 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-201ENST00000381089 Q9H8V8 135 aa11.18□□□□□ -0.62
VCX3A-201ENST00000381089 FXYD6-FXYD2A0A087WZ82 144 aa11.17□□□□□ -0.62
VCX3A-201ENST00000381089 TRAV8-2A0A0B4J237 113 aa11.17□□□□□ -0.62
VCX3A-201ENST00000381089 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
VCX3A-201ENST00000381089 OR10P1Q8NGE3 313 aa11.17□□□□□ -0.62
VCX3A-201ENST00000381089 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
VCX3A-201ENST00000381089 RNF24Q9Y225 148 aa11.17□□□□□ -0.62
VCX3A-201ENST00000381089 APOBP04114 4563 aaKnown RBP11.17□□□□□ -0.62
VCX3A-201ENST00000381089 GATA2P23769 480 aaPredicted RBP11.16□□□□□ -0.62
VCX3A-201ENST00000381089 SULT1A1P50225 295 aa11.16□□□□□ -0.62
VCX3A-201ENST00000381089 SLC38A11Q08AI6 406 aa11.16□□□□□ -0.62
VCX3A-201ENST00000381089 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
VCX3A-201ENST00000381089 GNPNAT1Q96EK6 184 aaPredicted RBP11.16□□□□□ -0.62
VCX3A-201ENST00000381089 HIGD1AQ9Y241 93 aa11.16□□□□□ -0.62
VCX3A-201ENST00000381089 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
VCX3A-201ENST00000381089 H3BRN7 92 aa11.15□□□□□ -0.62
VCX3A-201ENST00000381089 CDKN1BP46527 198 aa11.15□□□□□ -0.62
VCX3A-201ENST00000381089 DLK1P80370 383 aa11.15□□□□□ -0.62
VCX3A-201ENST00000381089 OR5I1Q13606 314 aa11.15□□□□□ -0.62
VCX3A-201ENST00000381089 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
VCX3A-201ENST00000381089 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
VCX3A-201ENST00000381089 SLC25A31Q9H0C2 315 aa11.15□□□□□ -0.62
VCX3A-201ENST00000381089 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
VCX3A-201ENST00000381089 A0A1W2PPQ1 181 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 G3V3Q6 166 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 H7BYZ3 331 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 HYPMO75409 117 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 BTF3P20290 206 aaKnown RBP11.14□□□□□ -0.63
VCX3A-201ENST00000381089 M6PRP20645 277 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
VCX3A-201ENST00000381089 NHLH2Q02577 135 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 PSG3Q16557 428 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 TMEM182Q6ZP80 229 aaPredicted RBP11.14□□□□□ -0.63
VCX3A-201ENST00000381089 CYP2G1PQ6ZSU1 146 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 ZNF503Q96F45 646 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 SMIM3Q9BZL3 60 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 Q9H3A6 140 aa11.14□□□□□ -0.63
VCX3A-201ENST00000381089 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 A0A087X0K7 114 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 UBE2L5PA0A1B0GUS4 154 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 OR5G3P0C626 314 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 HBG1P69891 147 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 HBG2P69892 147 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 AKAP14Q86UN6 197 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
VCX3A-201ENST00000381089 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 ST6GAL2Q96JF0 529 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 C20orf144Q9BQM9 153 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 HSPB11Q9Y547 144 aa11.13□□□□□ -0.63
VCX3A-201ENST00000381089 LINC00869P0C866 280 aa11.12□□□□□ -0.63
VCX3A-201ENST00000381089 SELENOTP62341 195 aa11.12□□□□□ -0.63
VCX3A-201ENST00000381089 BAXQ07812 192 aa11.12□□□□□ -0.63
VCX3A-201ENST00000381089 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
VCX3A-201ENST00000381089 UPK3BQ9BT76 320 aa11.12□□□□□ -0.63
VCX3A-201ENST00000381089 UQCC1Q9NVA1 299 aa11.12□□□□□ -0.63
VCX3A-201ENST00000381089 ARPC5O15511 151 aa11.11□□□□□ -0.63
VCX3A-201ENST00000381089 CXCL2P19875 107 aa11.11□□□□□ -0.63
VCX3A-201ENST00000381089 S100A11P31949 105 aa11.11□□□□□ -0.63
VCX3A-201ENST00000381089 ZNF546Q86UE3 836 aa11.11□□□□□ -0.63
VCX3A-201ENST00000381089 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
VCX3A-201ENST00000381089 GGACTQ9BVM4 153 aa11.11□□□□□ -0.63
VCX3A-201ENST00000381089 A0A0J9YY99 117 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 H3BNG1 76 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 PLP1P60201 277 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 CD300CQ08708 224 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 INO80EQ8NBZ0 244 aaPredicted RBP11.1□□□□□ -0.63
VCX3A-201ENST00000381089 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 TNFSF18Q9UNG2 199 aa11.1□□□□□ -0.63
VCX3A-201ENST00000381089 FNDC10F2Z333 226 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 FGF7P21781 194 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 KRTAP10-2P60368 255 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 LCN15Q6UWW0 184 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 TCTE3Q8IZS6 198 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 OR11H4Q8NGC9 324 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 AQP10Q96PS8 301 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 SLC50A1Q9BRV3 221 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 KRTAP1-5Q9BYS1 174 aa11.09□□□□□ -0.63
VCX3A-201ENST00000381089 MRPS16Q9Y3D3 137 aaKnown RBP11.09□□□□□ -0.63
VCX3A-201ENST00000381089 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms