RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 UBE2L3P68036 154 aaKnown RBP7.45□□□□□ -1.22
PTPRA-204ENST00000380393 ZNF415Q09FC8 603 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 EDDM3AQ14507 147 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 ZNF672Q499Z4 452 aaPredicted RBP7.45□□□□□ -1.22
PTPRA-204ENST00000380393 PDPNQ86YL7 162 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 MKXQ8IYA7 352 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 IGFBPL1Q8WX77 278 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 TRGV9Q99603 122 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 MALP21145 153 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 NPIPB3Q92617 1050 aa7.45□□□□□ -1.22
PTPRA-204ENST00000380393 MAP1BP46821 2468 aaKnown RBP7.44□□□□□ -1.22
PTPRA-204ENST00000380393 WI2-2373I1.2A0A1W2PRP0 233 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 HAX1O00165 279 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 P0C879 139 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 DEFB126Q9BYW3 111 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 A0A096LPE4 126 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 A0A1W2PPZ6 126 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 SHISA9B4DS77 424 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 LINC00322Q6ZN03 302 aaPredicted RBP7.44□□□□□ -1.22
PTPRA-204ENST00000380393 ZNF441Q8N8Z8 693 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 NABP1Q96AH0 204 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 C7orf69Q9H7B7 122 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A10PA6NDY2 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A20PA6NIJ5 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A7PA6NKC0 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A22PA8MWA6 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A12PA8MX19 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A23PA8MXZ1 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 CRYGDP07320 174 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 CD3EP07766 207 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A15PP0C7V4 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A13PP0C7W8 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A14PP0C7W9 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 FAM90A24PP0C7X0 464 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 KRTAP27-1Q3LI81 207 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 C1orf159Q96HA4 380 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 JPT2Q9H910 190 aa7.44□□□□□ -1.22
PTPRA-204ENST00000380393 TIMM23O14925 209 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 TCF15Q12870 199 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 Q6ZSR3 168 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 OCIAD1Q9NX40 245 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 ADAMTS20P59510 1910 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 TNRC6BQ9UPQ9 1833 aaKnown RBP7.43□□□□□ -1.22
PTPRA-204ENST00000380393 FER1L5A0AVI2 2057 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 LILRA5A6NI73 299 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 DPM2O94777 84 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 Q5XG85 94 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 CEMP1Q6PRD7 247 aaPredicted RBP7.43□□□□□ -1.22
PTPRA-204ENST00000380393 SLC25A2Q9BXI2 301 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 CACNA1GO43497 2377 aa7.43□□□□□ -1.22
PTPRA-204ENST00000380393 SPENQ96T58 3664 aaKnown RBP7.43□□□□□ -1.22
PTPRA-204ENST00000380393 C17orf98A8MV24 154 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 CCL4P13236 92 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 EFNA4P52798 201 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 LINC00205P59089 165 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PRR20EP86478 221 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PRR20CP86479 221 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PRR20DP86480 221 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PRR20BP86481 221 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PRR20AP86496 221 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 CT83Q5H943 113 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 TEX36Q5VZQ5 186 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PRSS33Q8NF86 280 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 RITA1Q96K30 269 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 FOXC2Q99958 501 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 ZNF256Q9Y2P7 627 aaPredicted RBP7.42□□□□□ -1.22
PTPRA-204ENST00000380393 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 NCBP2LA6PVI3 153 aaKnown RBP7.42□□□□□ -1.22
PTPRA-204ENST00000380393 D6R8Y8 96 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 C8orf88P0DMB2 117 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 HLA-DRB4P13762 266 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 TWIST1Q15672 202 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 FAM53AQ6NSI3 398 aaPredicted RBP7.42□□□□□ -1.22
PTPRA-204ENST00000380393 HLA-DRB4X5D2U9 266 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 IGHV5-10-1A0A0J9YXX1 117 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 K7EM74 188 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 RIGQ13278 110 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 AAED1Q7RTV5 226 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 PLXDC1Q8IUK5 500 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 DPH3Q96FX2 82 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 GFRA4Q9GZZ7 299 aa7.42□□□□□ -1.22
PTPRA-204ENST00000380393 FGF12P61328 243 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 FAM27BQ5VT28 67 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 PRSS22Q9GZN4 317 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 ZMAT4Q9H898 229 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 LINC00527Q9UJ94 153 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 ATMQ13315 3056 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 OVOL1O14753 267 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 ARMS2P0C7Q2 107 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 RNF138Q8WVD3 245 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 DSCR8Q96T75 97 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 TET2Q6N021 2002 aaPredicted RBP7.41□□□□□ -1.22
PTPRA-204ENST00000380393 IGHV3OR15-7A0A075B7D8 119 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 TRAV40A0A0B4J280 105 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 TRBV7-7A0A0K0K1E9 115 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 PRSS46E5RG02 174 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms