RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 LINC01560Q8TB33 94 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 SPAG8Q99932 426 aaPredicted RBP9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 PRRG2O14669 202 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 POU2AF1Q16633 256 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 ABHD17AQ96GS6 310 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 ZNF747Q9BV97 191 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 PIP4P2Q8N4L2 257 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 CACNG8Q8WXS5 425 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 ONECUT1Q9UBC0 465 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 SS18L2Q9UHA2 77 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 CENPEQ02224 2701 aa9.9□□□□□ -0.82
PRPF40B-202ENST00000380281 IGHV3OR16-13A0A075B7E8 117 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 IGHV3-74A0A0B4J1X5 117 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 FNDC10F2Z333 226 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 TMEM178BH3BS89 294 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 FXYD2P54710 66 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 FA2HQ7L5A8 372 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 GPR82Q96P67 336 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 MRPL32Q9BYC8 188 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 SMAD7O15105 426 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 LOXP28300 417 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 GATA4P43694 442 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 AMTNQ6UX39 209 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 TMEM167AQ8TBQ9 72 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 IGLV2-23P01705 113 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 LOXL1Q08397 574 aaPredicted RBP9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 BOD1L2Q8IYS8 172 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 VGLL1Q99990 258 aa9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 RPP21Q9H633 154 aaKnown RBP9.89□□□□□ -0.83
PRPF40B-202ENST00000380281 H3BMG7 143 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 CACNG7P62955 275 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 IGFL2Q6UWQ7 119 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 ATP5L2Q7Z4Y8 100 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 TMEM189A5PLL7 270 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 FAM90A27PA6NNH2 459 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 THBDP07204 575 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 RPEQ96AT9 228 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 MRAP2Q96G30 205 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 CUBNO60494 3623 aa9.88□□□□□ -0.83
PRPF40B-202ENST00000380281 TCRAP04437 139 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 IGHV1-8P0DP01 117 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 RNASE6Q93091 150 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 BSNQ9UPA5 3926 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 SORL1Q92673 2214 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 ARMS2P0C7Q2 107 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 PPIFP30405 207 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 RASL11BQ9BPW5 248 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 SPATA25Q9BR10 227 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 HIGD1AQ9Y241 93 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 J3QR89 54 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 GRNP28799 593 aaKnown RBP9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 KLRD1Q13241 179 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 C20orf78Q9BR46 151 aa9.87□□□□□ -0.83
PRPF40B-202ENST00000380281 NHP2Q9NX24 153 aaKnown RBP9.86□□□□□ -0.83
PRPF40B-202ENST00000380281 IL4P05112 153 aa9.86□□□□□ -0.83
PRPF40B-202ENST00000380281 PPP1R27Q86WC6 154 aa9.86□□□□□ -0.83
PRPF40B-202ENST00000380281 C7orf69Q9H7B7 122 aa9.86□□□□□ -0.83
PRPF40B-202ENST00000380281 E7EQL1 145 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 LTAP01374 205 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 Q6ZS92 163 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 FAM57AQ8TBR7 257 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 TMEM133Q9H2Q1 129 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 NCBP2LA6PVI3 153 aaKnown RBP9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 TCTEX1D4Q5JR98 221 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 TEX36Q5VZQ5 186 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 IGHV3-49A0A0A0MS15 119 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 IGHV3-66A0A0C4DH42 116 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 CSN1S1P47710 185 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 NDFIP1Q9BT67 221 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 SIGLEC9Q9Y336 463 aa9.85□□□□□ -0.83
PRPF40B-202ENST00000380281 SHISA2Q6UWI4 295 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 OR9G4Q8NGQ1 327 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 Q8TAT8 98 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 SLC25A39Q9BZJ4 359 aaPredicted RBP9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 HIVEP3Q5T1R4 2406 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 FOXI2Q6ZQN5 318 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 PIP4P1Q86T03 277 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 OR4X2Q8NGF9 303 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 RNF183Q96D59 192 aa9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 SRSF8Q9BRL6 282 aaKnown RBP9.84□□□□□ -0.83
PRPF40B-202ENST00000380281 IGHV1-3A0A0C4DH29 117 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 TIMM23O14925 209 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 RBPMS2Q6ZRY4 209 aaKnown RBP9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 FAM169BQ8N8A8 192 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 TMEM213A2RRL7 107 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 FSTL3O95633 263 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 USP9YO00507 2555 aaPredicted RBP9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 A0A096LNJ9 63 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 GP9P14770 177 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms