RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 OR4F17Q8NGA8 305 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 SMIM12Q96EX1 92 aa6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 RPP21Q9H633 154 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-204ENST00000380176 TRAV30A0A087WSZ9 112 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 PRSS29PA6NIE9 313 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 ATP6V0E1O15342 81 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 SCGB2A1O75556 95 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 ECSCRQ19T08 205 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 IQCJQ1A5X6 159 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 WIPF2Q8TF74 440 aaPredicted RBP6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 G3V318 75 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 NPFFO15130 113 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF253O75346 499 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 P01737 135 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 TPPP2P59282 170 aa6.21□□□□□ -1.42
PDLIM5-204ENST00000380176 PAFAH1B2P68402 229 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 COX19Q49B96 90 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 UNQ5815/PRO19632Q6UWF5 114 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 ZC2HC1AQ96GY0 325 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 PGLYRP4Q96LB8 373 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 TPPP3Q9BW30 176 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF492Q9P255 531 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV4-61A0A0C4DH41 118 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 A0A1B0GXF2 115 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 A0A1W2PS18 150 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 A8MWP6 167 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 GPX1P07203 203 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 PSG3Q16557 428 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 TDRG1Q3Y452 100 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 TMEM219Q86XT9 240 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 C1RLQ9NZP8 487 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 THYN1Q9P016 225 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
PDLIM5-204ENST00000380176 DIRC3C9JPN6 131 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 COL8A1P27658 744 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 BRS3P32247 399 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 CRIP1P50238 77 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 C15orf32Q32M92 178 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 IGFL4Q6B9Z1 124 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 RASL11AQ6T310 242 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 BRD3OSQ6XYD6 125 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 FAM110AQ9BQ89 295 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 SOX21Q9Y651 276 aaPredicted RBP6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 SMAD5-AS1Q9Y6J3 95 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 A8MWL6 223 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 S100A7P31151 101 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 GPR183P32249 361 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 DAZAP1Q96EP5 407 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 PSG8Q9UQ74 426 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 PMCHP20382 165 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 RHOGP84095 191 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 PAX8Q06710 450 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 LYPD1Q8N2G4 141 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 FAM110DQ8TAY7 271 aaPredicted RBP6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 KCNS1Q96KK3 526 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 C8orf49Q96NF6 230 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 MYO18BQ8IUG5 2567 aa6.19□□□□□ -1.42
PDLIM5-204ENST00000380176 ZFYVE26Q68DK2 2539 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 A0A1B0GV72 72 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF705FA8MVS1 300 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 M0R143 59 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF705DP0CH99 300 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF705BP0CI00 300 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 HLA-DMBP28068 263 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 ATP5L2Q7Z4Y8 100 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 SIGLECL1Q8N7X8 197 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF502Q8TBZ5 544 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 CCL19Q99731 98 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 ALKBH7Q9BT30 221 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 LINC00527Q9UJ94 153 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 SCGB1A1P11684 91 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 AMTP48728 403 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 C5orf56Q8N8D9 126 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 NRN1Q9NPD7 142 aa6.18□□□□□ -1.42
PDLIM5-204ENST00000380176 IGKV2-40A0A087WW87 121 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 TRBV6-1A0A0K0K1D8 114 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 BRI3O95415 125 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 IGKV2D-40P01614 121 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHG4P01861 327 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 PTTG1IPP53801 180 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 HBBP68871 147 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 TOMM20LQ6UXN7 152 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 RBPMS2Q6ZRY4 209 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 NIT1Q86X76 327 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 VN1R17PQ8TDU5 208 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 RABAC1Q9UI14 185 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 TRAV40A0A0B4J280 105 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV3-66A0A0C4DH42 116 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 TCF21O43680 179 aa6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 ZNF324O75467 553 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 APOHP02749 345 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-204ENST00000380176 IGHV4-38-2P0DP08 117 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms