RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SHANK2-AS3Q9BTD1 123 aa9.06□□□□□ -0.96
SMAD9-202ENST00000379826 IGKCP01834 107 aa9.06□□□□□ -0.96
SMAD9-202ENST00000379826 LOXP28300 417 aaPredicted RBP9.06□□□□□ -0.96
SMAD9-202ENST00000379826 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
SMAD9-202ENST00000379826 TMEM75Q8N9X5 138 aa9.06□□□□□ -0.96
SMAD9-202ENST00000379826 H7C2G1 150 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 LINC00322Q6ZN03 302 aaPredicted RBP9.05□□□□□ -0.96
SMAD9-202ENST00000379826 GTF3C1Q12789 2109 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 TRBV19A0A075B6N1 114 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 FAM71F2Q6NXP2 309 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 CT83Q5H943 113 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 HTN1P15515 57 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 BCL6BQ8N143 479 aaPredicted RBP9.05□□□□□ -0.96
SMAD9-202ENST00000379826 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 NCOR1P1Q9H4R4 102 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 SIGLEC8Q9NYZ4 499 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 CTSZQ9UBR2 303 aa9.05□□□□□ -0.96
SMAD9-202ENST00000379826 PSMB2P49721 201 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 LCNL1Q6ZST4 164 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 SEM1Q6ZVN7 128 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 PRSS22Q9GZN4 317 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 PHLDA3Q9Y5J5 127 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 FABP5P3A8MUU1 101 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 COX8AP10176 69 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 GP9P14770 177 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 TMEM155Q4W5P6 130 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 FAM120AOSQ5T036 256 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 E7EQL1 145 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 CTRLP40313 264 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 K7EM74 188 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 RHOGP84095 191 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 MRPL51Q4U2R6 128 aaKnown RBP9.04□□□□□ -0.96
SMAD9-202ENST00000379826 GLMPQ8WWB7 406 aa9.04□□□□□ -0.96
SMAD9-202ENST00000379826 TTC28Q96AY4 2481 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 GPR179Q6PRD1 2367 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 OR10J6PQ8NGY7 276 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 USF3Q68DE3 2245 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 DPM2O94777 84 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 IGLC1P0CG04 106 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 SCGB3A1Q96QR1 104 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 MED13Q9UHV7 2174 aa9.03□□□□□ -0.96
SMAD9-202ENST00000379826 IGKV1D-37A0A075B6S9 117 aa9.02□□□□□ -0.96
SMAD9-202ENST00000379826 C2orf70A6NJV1 201 aa9.02□□□□□ -0.96
SMAD9-202ENST00000379826 ATP5G2Q06055 141 aa9.02□□□□□ -0.96
SMAD9-202ENST00000379826 SAMD13Q5VXD3 122 aa9.02□□□□□ -0.96
SMAD9-202ENST00000379826 INTS1Q8N201 2190 aaKnown RBP9.02□□□□□ -0.97
SMAD9-202ENST00000379826 IGHV2-70DA0A0C4DH43 119 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 CR1LQ2VPA4 569 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 LINC00527Q9UJ94 153 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 SPTBN5Q9NRC6 3674 aaKnown RBP9.02□□□□□ -0.97
SMAD9-202ENST00000379826 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 FAM104BQ5XKR9 115 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 OR1N2Q8NGR9 330 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 DKK2Q9UBU2 259 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 CACNA1HO95180 2353 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 TNRC6AQ8NDV7 1962 aaKnown RBP9.02□□□□□ -0.97
SMAD9-202ENST00000379826 H3BRN7 92 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 NPYP01303 97 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 RNASE4P34096 147 aaKnown RBP9.02□□□□□ -0.97
SMAD9-202ENST00000379826 WFDC12Q8WWY7 111 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 TNFRSF14Q92956 283 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.97
SMAD9-202ENST00000379826 K7ERJ3 54 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 TAX1BP3O14907 124 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 NDPQ00604 133 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 ZNF672Q499Z4 452 aaPredicted RBP9.02□□□□□ -0.97
SMAD9-202ENST00000379826 OR9G4Q8NGQ1 327 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 EEF1AKMT3Q96AZ1 226 aa9.02□□□□□ -0.97
SMAD9-202ENST00000379826 HLA-DMBP28068 263 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 HERVK_113P61574 105 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 Q8N976 141 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 CIDEAO60543 219 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 PAX1P15863 534 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 VMO1Q7Z5L0 202 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 TTC9CQ8N5M4 171 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 K7EMI3 77 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 ZNF747Q9BV97 191 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 VCANP13611 3396 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 OR11H12B2RN74 326 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 FAM106AQ4KMX7 169 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 OR11H1Q8NG94 326 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 OR11H2Q8NH07 326 aa9.01□□□□□ -0.97
SMAD9-202ENST00000379826 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 VGLL1Q99990 258 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 TRAV40A0A0B4J280 105 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 C9orf118A6NHY6 69 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9□□□□□ -0.97
SMAD9-202ENST00000379826 ATP5LO75964 103 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 CDKN1BP46527 198 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 OR5A1Q8NGJ0 315 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 A0A1B0GWB2 263 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 NDUFS8O00217 210 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 C15orf32Q32M92 178 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 CHAC1Q9BUX1 264 aa9□□□□□ -0.97
SMAD9-202ENST00000379826 PCP2Q8IVA1 136 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms