RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CCL19Q99731 98 aa8.58□□□□□ -1.04
NEDD9-201ENST00000379433 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV3OR16-13A0A075B7E8 117 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV3-74A0A0B4J1X5 117 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 TMEM189A5PLL7 270 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 GALR1P47211 349 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 TMEM30BQ3MIR4 351 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 AMMECR1Q9Y4X0 333 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-201ENST00000379433 HSBP1O75506 76 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 RPL7P18124 248 aaKnown RBP8.57□□□□□ -1.04
NEDD9-201ENST00000379433 EFNA4P52798 201 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 LY6EQ16553 131 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 TIGITQ495A1 244 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 LINC00311Q8N616 119 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 PEMTQ9UBM1 199 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 FUT9Q9Y231 359 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 OR2T8A6NH00 312 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV4-39P01824 125 aa8.57□□□□□ -1.04
NEDD9-201ENST00000379433 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-201ENST00000379433 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
NEDD9-201ENST00000379433 PRR20EP86478 221 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 PRR20CP86479 221 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 PRR20DP86480 221 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 PRR20BP86481 221 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 PRR20AP86496 221 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 HIST2H2BCQ6DN03 193 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 PQLC2Q6ZP29 291 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 STHQ8IWL8 128 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 NBPF19A0A087WUL8 3843 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-201ENST00000379433 SAA4P35542 130 aa8.56□□□□□ -1.04
NEDD9-201ENST00000379433 SP5Q6BEB4 398 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-201ENST00000379433 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
NEDD9-201ENST00000379433 MRGPRG-AS1Q2M3A8 158 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 KCNIP2Q9NS61 270 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 UQCR10Q9UDW1 63 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 NF1P21359 2839 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 FABP5P3A8MUU1 101 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 B4DEV8 164 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 CX3CL1P78423 397 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 RNASE7Q9H1E1 156 aaKnown RBP8.55□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV3-49A0A0A0MS15 119 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 TRAV40A0A0B4J280 105 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV4-61A0A0C4DH41 118 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 MDFIC2A0A1B0GVS7 189 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 NDPQ00604 133 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 DTX2Q86UW9 622 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 C8orf46Q8TAG6 207 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 ZNF503Q96F45 646 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
NEDD9-201ENST00000379433 TMEM250H0YL14 139 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 C8orf88P0DMB2 117 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 Q56UQ5 140 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 PATE2Q6UY27 113 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 BCL6BQ8N143 479 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-201ENST00000379433 TEX45Q8NA69 505 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 SGMS2Q8NHU3 365 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 FAM168AQ92567 244 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 GRAMD2BQ96HH9 432 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 SPAG8Q99932 426 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-201ENST00000379433 GNB4Q9HAV0 340 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 MXRA5Q9NR99 2828 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 GGTLC3B5MD39 225 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-201ENST00000379433 ADAMTSL5Q6ZMM2 481 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 FAM19A5Q7Z5A7 132 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-201ENST00000379433 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 RASL11BQ9BPW5 248 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 ITPR2Q14571 2701 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 LINC01548A6NM66 108 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 TAS2R45P59539 299 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 PNRC1Q12796 327 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-201ENST00000379433 WIPF2Q8TF74 440 aaPredicted RBP8.54□□□□□ -1.04
NEDD9-201ENST00000379433 CDC42EP3Q9UKI2 254 aa8.54□□□□□ -1.04
NEDD9-201ENST00000379433 IGKV1D-37A0A075B6S9 117 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 TCRBV4S1A1TA0A5B7 111 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 C7orf71A4D174 169 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 TEX22C9J3V5 150 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 G3V318 75 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 GNG4P50150 75 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 IGHV4-30-2A0A087WSY4 118 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 FRMD6-AS1P0C7T7 363 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 ZNF137PP52743 207 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 AP1S3Q96PC3 154 aa8.53□□□□□ -1.04
NEDD9-201ENST00000379433 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
NEDD9-201ENST00000379433 IL4P05112 153 aa8.52□□□□□ -1.04
NEDD9-201ENST00000379433 SLC25A5P05141 298 aaKnown RBP8.52□□□□□ -1.04
NEDD9-201ENST00000379433 CD33P20138 364 aa8.52□□□□□ -1.04
NEDD9-201ENST00000379433 PSG9Q00887 426 aa8.52□□□□□ -1.04
NEDD9-201ENST00000379433 PIP4P2Q8N4L2 257 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms