RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 IGLC3P0DOY3 106 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 DEFB112Q30KQ8 113 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 ATOH7Q8N100 152 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 RNF125Q96EQ8 232 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 WI2-2373I1.2A0A1W2PRP0 233 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 CTSGP08311 255 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 NBEAP1P0C6P0 100 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 FCGR2BP31994 310 aaPredicted RBP15.12■□□□□ 0.01
SSU72-204ENST00000378726 ANKRD39Q53RE8 183 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 LCN12Q6JVE5 192 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 BLNKQ8WV28 456 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 BORCS7Q96B45 105 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 BLCAPP62952 87 aa15.11■□□□□ 0.01
SSU72-204ENST00000378726 MAJINQ3KP22 176 aa15.11■□□□□ 0.01
SSU72-204ENST00000378726 PRR31Q5SQ13 230 aa15.11■□□□□ 0.01
SSU72-204ENST00000378726 RASL11AQ6T310 242 aa15.11■□□□□ 0.01
SSU72-204ENST00000378726 SGK494Q96LW2 274 aa15.11■□□□□ 0.01
SSU72-204ENST00000378726 SSBP4Q9BWG4 385 aaPredicted RBP15.11■□□□□ 0.01
SSU72-204ENST00000378726 C20orf202A1L168 122 aa15.1■□□□□ 0.01
SSU72-204ENST00000378726 GP9P14770 177 aa15.1■□□□□ 0.01
SSU72-204ENST00000378726 CRIP2P52943 208 aaPredicted RBP15.1■□□□□ 0.01
SSU72-204ENST00000378726 Q6ZN92 141 aa15.1■□□□□ 0.01
SSU72-204ENST00000378726 ARL6IP6Q8N6S5 226 aa15.1■□□□□ 0.01
SSU72-204ENST00000378726 ZNF502Q8TBZ5 544 aa15.1■□□□□ 0.01
SSU72-204ENST00000378726 CHRDL1Q9BU40 450 aa15.1■□□□□ 0.01
SSU72-204ENST00000378726 SCGB2A1O75556 95 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 IGHG2P01859 326 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 CLEC3BP05452 202 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 MYCNOSP40205 109 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 SHANK2-AS3Q9BTD1 123 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 HIGD1CA8MV81 97 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 IGF1P05019 195 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 CAMPP49913 170 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 C19orf54Q5BKX5 351 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 STPG4Q8N801 248 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 ORAOV1Q8WV07 137 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 CR1P17927 2039 aa15.09■□□□□ 0.01
SSU72-204ENST00000378726 GPR183P32249 361 aa15.08■□□□□ 0
SSU72-204ENST00000378726 KLF5Q13887 457 aaPredicted RBP15.08■□□□□ 0
SSU72-204ENST00000378726 ALKBH7Q9BT30 221 aaPredicted RBP15.08■□□□□ 0
SSU72-204ENST00000378726 TMEM14CQ9P0S9 112 aa15.08■□□□□ 0
SSU72-204ENST00000378726 LAMTOR2Q9Y2Q5 125 aa15.08■□□□□ 0
SSU72-204ENST00000378726 PRRC2AP48634 2157 aaKnown RBP15.08■□□□□ 0
SSU72-204ENST00000378726 H3BRN7 92 aa15.08■□□□□ 0
SSU72-204ENST00000378726 IGHV4-59P01825 116 aa15.08■□□□□ 0
SSU72-204ENST00000378726 HNRNPA3P51991 378 aaKnown RBP15.08■□□□□ 0
SSU72-204ENST00000378726 EBLN2Q6P2I7 272 aa15.08■□□□□ 0
SSU72-204ENST00000378726 Q6ZS46 218 aa15.08■□□□□ 0
SSU72-204ENST00000378726 EPDR1Q9UM22 224 aa15.08■□□□□ 0
SSU72-204ENST00000378726 FAM181BA6NEQ2 426 aa15.07■□□□□ 0
SSU72-204ENST00000378726 H3BTX0 84 aa15.07■□□□□ 0
SSU72-204ENST00000378726 HSBP1O75506 76 aa15.07■□□□□ 0
SSU72-204ENST00000378726 PGPA6NDG6 321 aa15.07■□□□□ 0
SSU72-204ENST00000378726 M0R2Z0 102 aa15.07■□□□□ 0
SSU72-204ENST00000378726 FSHBP01225 129 aa15.07■□□□□ 0
SSU72-204ENST00000378726 SLC25A5P05141 298 aaKnown RBP15.07■□□□□ 0
SSU72-204ENST00000378726 HIST1H1EP10412 219 aaKnown RBP15.07■□□□□ 0
SSU72-204ENST00000378726 RNASEKQ6P5S7 137 aaKnown RBP15.07■□□□□ 0
SSU72-204ENST00000378726 S100A7AQ86SG5 101 aa15.07■□□□□ 0
SSU72-204ENST00000378726 KLHDC1Q8N7A1 406 aa15.07■□□□□ 0
SSU72-204ENST00000378726 EEF1AKMT3Q96AZ1 226 aa15.07■□□□□ 0
SSU72-204ENST00000378726 RPH3ALQ9UNE2 315 aa15.07■□□□□ 0
SSU72-204ENST00000378726 CREBBPQ92793 2442 aa15.06■□□□□ 0
SSU72-204ENST00000378726 IGHV3-35A0A0C4DH35 117 aa15.06■□□□□ 0
SSU72-204ENST00000378726 PTTG1IPP53801 180 aa15.06■□□□□ 0
SSU72-204ENST00000378726 UBE2G1P62253 170 aa15.06■□□□□ 0
SSU72-204ENST00000378726 ATP5G2Q06055 141 aa15.06■□□□□ 0
SSU72-204ENST00000378726 CLEC19AQ6UXS0 136 aa15.06■□□□□ 0
SSU72-204ENST00000378726 LINC00322Q6ZN03 302 aaPredicted RBP15.06■□□□□ 0
SSU72-204ENST00000378726 TCF24Q7RTU0 167 aa15.06■□□□□ 0
SSU72-204ENST00000378726 BPIFA4PQ86YQ2 179 aa15.06■□□□□ 0
SSU72-204ENST00000378726 WFDC11Q8NEX6 87 aa15.06■□□□□ 0
SSU72-204ENST00000378726 TRBV7-1A0A0A6YYK4 115 aa15.05■□□□□ -0
SSU72-204ENST00000378726 A0A1B0GXF2 115 aa15.05■□□□□ -0
SSU72-204ENST00000378726 CCDC140Q96MF4 163 aa15.05■□□□□ -0
SSU72-204ENST00000378726 TRGV3P03979 118 aa15.04■□□□□ -0
SSU72-204ENST00000378726 PPIFP30405 207 aaKnown RBP15.04■□□□□ -0
SSU72-204ENST00000378726 URB1-AS1Q96HZ7 61 aa15.04■□□□□ -0
SSU72-204ENST00000378726 TEX15Q9BXT5 2789 aa15.04■□□□□ -0
SSU72-204ENST00000378726 SPATA12Q7Z6I5 190 aa15.04■□□□□ -0
SSU72-204ENST00000378726 CCL25O15444 150 aa15.03■□□□□ -0
SSU72-204ENST00000378726 PMCHL1Q16048 86 aa15.03■□□□□ -0
SSU72-204ENST00000378726 C9orf139Q6ZV77 190 aa15.03■□□□□ -0
SSU72-204ENST00000378726 CIARTQ8N365 385 aaPredicted RBP15.03■□□□□ -0
SSU72-204ENST00000378726 OR4F17Q8NGA8 305 aa15.03■□□□□ -0
SSU72-204ENST00000378726 OR2D3Q8NGH3 330 aa15.03■□□□□ -0
SSU72-204ENST00000378726 Q9H3A6 140 aa15.03■□□□□ -0
SSU72-204ENST00000378726 KLF12Q9Y4X4 402 aa15.03■□□□□ -0
SSU72-204ENST00000378726 ZNF469Q96JG9 3925 aaPredicted RBP15.03■□□□□ -0
SSU72-204ENST00000378726 C2orf70A6NJV1 201 aa15.02■□□□□ -0
SSU72-204ENST00000378726 FAM223BA6NKX1 122 aa15.02■□□□□ -0
SSU72-204ENST00000378726 TSPOP30536 169 aa15.02■□□□□ -0
SSU72-204ENST00000378726 ATP5L2Q7Z4Y8 100 aa15.02■□□□□ -0
SSU72-204ENST00000378726 FAM223AQ8IWN6 122 aa15.02■□□□□ -0
SSU72-204ENST00000378726 GPR82Q96P67 336 aa15.02■□□□□ -0
SSU72-204ENST00000378726 MLST8Q9BVC4 326 aa15.02■□□□□ -0
SSU72-204ENST00000378726 RABAC1Q9UI14 185 aa15.02■□□□□ -0
SSU72-204ENST00000378726 RNF24Q9Y225 148 aa15.02■□□□□ -0
SSU72-204ENST00000378726 MRPS16Q9Y3D3 137 aaKnown RBP15.02■□□□□ -0
SSU72-204ENST00000378726 RBX1P62877 108 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms