RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TPT1P13693 172 aaKnown RBP13.71□□□□□ -0.21
SSU72-203ENST00000378725 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
SSU72-203ENST00000378725 UBE2L3P68036 154 aaKnown RBP13.71□□□□□ -0.21
SSU72-203ENST00000378725 ZNF726P1Q15940 193 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 LYPD1Q8N2G4 141 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 OR4B1Q8NGF8 309 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 SUN5Q8TC36 379 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 RNF183Q96D59 192 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 RCHY1Q96PM5 261 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 RETNQ9HD89 108 aa13.71□□□□□ -0.21
SSU72-203ENST00000378725 PRAC2D3DTV9 90 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 SPRY2O43597 315 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 ZNF705DP0CH99 300 aaPredicted RBP13.7□□□□□ -0.22
SSU72-203ENST00000378725 ZNF705BP0CI00 300 aaPredicted RBP13.7□□□□□ -0.22
SSU72-203ENST00000378725 C4BPBP20851 252 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 CNN1P51911 297 aaKnown RBP13.7□□□□□ -0.22
SSU72-203ENST00000378725 AMTNQ6UX39 209 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 SSX7Q7RTT5 188 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 EXOC3-AS1Q8N2X6 119 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 PHYHIPLQ96FC7 376 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 AAMDCQ9H7C9 122 aa13.7□□□□□ -0.22
SSU72-203ENST00000378725 CTXND1A0A1B0GTU2 59 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 UMAD1C9J7I0 102 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 CXorf1O96002 111 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 IGKV3-20P01619 116 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 ARL14EPLP0DKL9 152 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 ICAM4Q14773 271 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 DEFB135Q30KP9 77 aa13.69□□□□□ -0.22
SSU72-203ENST00000378725 M0R3E3 92 aa13.68□□□□□ -0.22
SSU72-203ENST00000378725 GCHFRP30047 84 aa13.68□□□□□ -0.22
SSU72-203ENST00000378725 RANP62826 216 aaKnown RBP13.68□□□□□ -0.22
SSU72-203ENST00000378725 SLC51BQ86UW2 128 aa13.68□□□□□ -0.22
SSU72-203ENST00000378725 CSNK1G2-AS1Q8NCQ2 148 aa13.68□□□□□ -0.22
SSU72-203ENST00000378725 Q9H3A6 140 aa13.68□□□□□ -0.22
SSU72-203ENST00000378725 PRB4P10163 310 aaPredicted RBP13.67□□□□□ -0.22
SSU72-203ENST00000378725 HIST1H1AQ02539 215 aaPredicted RBP13.67□□□□□ -0.22
SSU72-203ENST00000378725 TMED6Q8WW62 240 aa13.67□□□□□ -0.22
SSU72-203ENST00000378725 C1QTNF4Q9BXJ3 329 aa13.67□□□□□ -0.22
SSU72-203ENST00000378725 EIF5AL1Q6IS14 154 aaKnown RBP13.66□□□□□ -0.22
SSU72-203ENST00000378725 DPPA3Q6W0C5 159 aa13.66□□□□□ -0.22
SSU72-203ENST00000378725 OR10J6PQ8NGY7 276 aa13.66□□□□□ -0.22
SSU72-203ENST00000378725 SLC35B3Q9H1N7 401 aa13.66□□□□□ -0.22
SSU72-203ENST00000378725 TMEM167BQ9NRX6 74 aa13.66□□□□□ -0.22
SSU72-203ENST00000378725 AGRNO00468 2067 aa13.66□□□□□ -0.22
SSU72-203ENST00000378725 FHITP49789 147 aa13.65□□□□□ -0.22
SSU72-203ENST00000378725 OTORQ9NRC9 128 aa13.65□□□□□ -0.22
SSU72-203ENST00000378725 XCL2Q9UBD3 114 aa13.65□□□□□ -0.22
SSU72-203ENST00000378725 PGPA6NDG6 321 aa13.64□□□□□ -0.23
SSU72-203ENST00000378725 NPIPB6E9PJ23 425 aa13.64□□□□□ -0.23
SSU72-203ENST00000378725 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
SSU72-203ENST00000378725 FXYD7P58549 80 aa13.64□□□□□ -0.23
SSU72-203ENST00000378725 ARL6IP6Q8N6S5 226 aa13.64□□□□□ -0.23
SSU72-203ENST00000378725 MBD3L1Q8WWY6 194 aa13.64□□□□□ -0.23
SSU72-203ENST00000378725 COL7A1Q02388 2944 aa13.64□□□□□ -0.23
SSU72-203ENST00000378725 HUWE1Q7Z6Z7 4374 aaKnown RBP13.64□□□□□ -0.23
SSU72-203ENST00000378725 MAP1LC3B2A6NCE7 125 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 AMBPP02760 352 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 CSN1S1P47710 185 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 RXFP4Q8TDU9 374 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 LINC00477Q96M19 166 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 RARRES2Q99969 163 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 MAP1LC3BQ9GZQ8 125 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 TGP01266 2768 aa13.63□□□□□ -0.23
SSU72-203ENST00000378725 ZNF705EA8MWA4 302 aaPredicted RBP13.62□□□□□ -0.23
SSU72-203ENST00000378725 BOLA2-SMG1P6H3BVE0 249 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 CT45A10P0DMU9 189 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 RAB5CP51148 216 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 FGF8P55075 233 aaPredicted RBP13.62□□□□□ -0.23
SSU72-203ENST00000378725 FAM74A1Q5RGS3 127 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 C9orf47Q6ZRZ4 202 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 OR11H2Q8NH07 326 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 ODF3Q96PU9 254 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 AGPAT4-IT1Q9H0P7 198 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 TMPRSS5Q9H3S3 457 aa13.62□□□□□ -0.23
SSU72-203ENST00000378725 RBAKDNA6NC62 111 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 DIRC3C9JPN6 131 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 CRXO43186 299 aaPredicted RBP13.61□□□□□ -0.23
SSU72-203ENST00000378725 SULT1A2P50226 295 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 ERCC8Q13216 396 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 SPINK13Q1W4C9 94 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 IGF2BP2-AS1Q96M15 143 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 EDA2RQ9HAV5 297 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 PPP1R14DQ9NXH3 145 aa13.61□□□□□ -0.23
SSU72-203ENST00000378725 IGKV2-40A0A087WW87 121 aaPredicted RBP13.6□□□□□ -0.23
SSU72-203ENST00000378725 A0A1W2PRE2 83 aa13.6□□□□□ -0.23
SSU72-203ENST00000378725 M0R2Z0 102 aa13.6□□□□□ -0.23
SSU72-203ENST00000378725 IGKV2D-40P01614 121 aaPredicted RBP13.6□□□□□ -0.23
SSU72-203ENST00000378725 SLC25A5P05141 298 aaKnown RBP13.6□□□□□ -0.23
SSU72-203ENST00000378725 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
SSU72-203ENST00000378725 SFT2D1Q8WV19 159 aa13.6□□□□□ -0.23
SSU72-203ENST00000378725 FAM19A4Q96LR4 140 aa13.6□□□□□ -0.23
SSU72-203ENST00000378725 VGLL1Q99990 258 aa13.6□□□□□ -0.23
SSU72-203ENST00000378725 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
SSU72-203ENST00000378725 CDKN1BP46527 198 aa13.59□□□□□ -0.23
SSU72-203ENST00000378725 IQCF2Q8IXL9 164 aa13.59□□□□□ -0.23
SSU72-203ENST00000378725 C1orf158Q8N1D5 194 aa13.59□□□□□ -0.23
SSU72-203ENST00000378725 CMTM2Q8TAZ6 248 aa13.59□□□□□ -0.23
SSU72-203ENST00000378725 BOLA1Q9Y3E2 137 aa13.59□□□□□ -0.23
SSU72-203ENST00000378725 X6R8D5 127 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms