RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 CACNA1AO00555 2505 aa15.23■□□□□ 0.03
SHROOM1-202ENST00000378676 CCDC144NLQ6NUI1 221 aa15.23■□□□□ 0.03
SHROOM1-202ENST00000378676 TMSB15BA0A087X1C1 80 aa15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 TMEM11P17152 192 aa15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 MCRIP2Q9BUT9 160 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 SPTBN1Q01082 2364 aaKnown RBP15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 IGHV7-81A0A0B4J1V7 117 aa15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 hDV102S1A0JD36 115 aa15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 HINT1P49773 126 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 EBI3Q14213 229 aa15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 UNQ5815/PRO19632Q6UWF5 114 aa15.22■□□□□ 0.03
SHROOM1-202ENST00000378676 IGHV3OR16-8A0A075B7F1 116 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 SH2D1AO60880 128 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 ASH1LQ9NR48 2969 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 CTSGP08311 255 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 CT45A10P0DMU9 189 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 RPS20P60866 119 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 IGFL4Q6B9Z1 124 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 DTX2Q86UW9 622 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 SMAD5-AS1Q9Y6J3 95 aa15.21■□□□□ 0.03
SHROOM1-202ENST00000378676 HLA-DMBP28068 263 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 C1orf122Q6ZSJ8 110 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 OR4C5Q8NGB2 326 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 SIRPDQ9H106 197 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 TIMM8BQ9Y5J9 83 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 IGHV3-35A0A0C4DH35 117 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 LYZL1Q6UWQ5 148 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 S100A7AQ86SG5 101 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 Q8N9W7 124 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 Q8TAT8 98 aa15.2■□□□□ 0.02
SHROOM1-202ENST00000378676 HIVEP3Q5T1R4 2406 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 TMEM213A2RRL7 107 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 OOSP1A8MZH6 123 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 CSN1S1P47710 185 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 MINOS1Q5TGZ0 78 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 Q6AWC8 147 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 THYN1Q9P016 225 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 MINOS1-NBL1R4GNA1 71 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 H0Y8G0 127 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 PSG9Q00887 426 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 PRORYQ9H606 182 aa15.19■□□□□ 0.02
SHROOM1-202ENST00000378676 A0A1B0GW15 77 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 TMEM189A5PLL7 270 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 IGHG4P01861 327 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 OR5AL1P0C617 328 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 RPL7P18124 248 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 SMIM15Q7Z3B0 74 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 MUC21A0A0G2JKD1 596 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 MUC21A0A140T8X8 626 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 MUC21Q5SSG8 566 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 Q6ZVH6 145 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 RABAC1Q9UI14 185 aa15.18■□□□□ 0.02
SHROOM1-202ENST00000378676 ZNF493Q6ZR52 646 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 AJUBAQ96IF1 538 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 VGLL1Q99990 258 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 MAP1LC3CQ9BXW4 147 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 SERTM2A0A1B0GWG4 89 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 FAM106CPP0CH98 169 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 ZNF80P51504 273 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 FAM106AQ4KMX7 169 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 PRR25Q96S07 402 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 PMCHL2Q9BQD1 86 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 TMEM191AQ9H0A3 160 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 ST20Q9HBF5 79 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 AP5S1Q9NUS5 200 aa15.17■□□□□ 0.02
SHROOM1-202ENST00000378676 SVEP1Q4LDE5 3571 aa15.16■□□□□ 0.02
SHROOM1-202ENST00000378676 RHOGP84095 191 aa15.16■□□□□ 0.02
SHROOM1-202ENST00000378676 ECSCRQ19T08 205 aa15.16■□□□□ 0.02
SHROOM1-202ENST00000378676 RNF151Q2KHN1 245 aa15.16■□□□□ 0.02
SHROOM1-202ENST00000378676 PET117Q6UWS5 81 aa15.16■□□□□ 0.02
SHROOM1-202ENST00000378676 AMN1Q8IY45 258 aa15.16■□□□□ 0.02
SHROOM1-202ENST00000378676 D6R8Y8 96 aa15.15■□□□□ 0.02
SHROOM1-202ENST00000378676 GPR183P32249 361 aa15.15■□□□□ 0.02
SHROOM1-202ENST00000378676 LOXL1Q08397 574 aaPredicted RBP15.15■□□□□ 0.02
SHROOM1-202ENST00000378676 COX8CQ7Z4L0 72 aa15.15■□□□□ 0.02
SHROOM1-202ENST00000378676 HSPB8Q9UJY1 196 aa15.15■□□□□ 0.02
SHROOM1-202ENST00000378676 CACNA1BQ00975 2339 aa15.15■□□□□ 0.02
SHROOM1-202ENST00000378676 IFI27P40305 119 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-202ENST00000378676 FA2HQ7L5A8 372 aa15.14■□□□□ 0.01
SHROOM1-202ENST00000378676 PRSS3P2Q8NHM4 247 aa15.14■□□□□ 0.01
SHROOM1-202ENST00000378676 A0A096LNJ9 63 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 ATP6V0E1O15342 81 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 NCR2O95944 276 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 C15orf32Q32M92 178 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 FAM110DQ8TAY7 271 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 ZNF502Q8TBZ5 544 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 LINC01545Q5VT33 79 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 FAM104BQ5XKR9 115 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 ZNF747Q9BV97 191 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 ZFAND3Q9H8U3 227 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 UBTD1Q9HAC8 227 aa15.13■□□□□ 0.01
SHROOM1-202ENST00000378676 LOC389332A0A1B0GUA5 103 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 TMEM8BA6NDV4 472 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 ZNF575Q86XF7 245 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 SIGLEC8Q9NYZ4 499 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 U3KQK5 164 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 VAMP3Q15836 100 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 SCRT2Q9NQ03 307 aa15.12■□□□□ 0.01
SHROOM1-202ENST00000378676 SCGB2A1O75556 95 aa15.11■□□□□ 0.01
SHROOM1-202ENST00000378676 SAA4P35542 130 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms