RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 NMUP48645 174 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 PRR31Q5SQ13 230 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 ST6GALNAC6Q969X2 333 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 GFI1BQ5VTD9 330 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 DUX3Q96PT4 197 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 DUSP14O95147 198 aaKnown RBP11.49□□□□□ -0.57
TCOF1-202ENST00000377797 IGHV4-38-2P0DP08 117 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 SRSF9Q13242 221 aaKnown RBP eCLIP11.49□□□□□ -0.57
TCOF1-202ENST00000377797 C12orf54Q6X4T0 127 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 KCNS1Q96KK3 526 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 UNC80Q8N2C7 3258 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 E7EUB6 86 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 SYNJ2BPP57105 145 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 Q86TA4 180 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 TTC9CQ8N5M4 171 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 P0C879 139 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 PLA2G5P39877 138 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 ZNF491Q8N8L2 437 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 LCNL1Q6ZST4 164 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 ZNF114Q8NC26 417 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
TCOF1-202ENST00000377797 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 DMRTA1Q5VZB9 504 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 KIR2DL4Q99706 377 aa11.48□□□□□ -0.57
TCOF1-202ENST00000377797 IGHV7-81A0A0B4J1V7 117 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 IGLV2-23P01705 113 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 ARHGAP32A7KAX9 2087 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 UBE2CO00762 179 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 FCN3O75636 299 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 HERVK_113P61574 105 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 NPBQ8NG41 125 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 FXYD5Q96DB9 178 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 LINC01587Q99440 93 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 IGHV4-59P01825 116 aa11.47□□□□□ -0.57
TCOF1-202ENST00000377797 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-202ENST00000377797 OR4C46A6NHA9 309 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 NSUN5P1Q3KNT7 163 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 H3BRN7 92 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 H3BVH4 76 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 DEFB113Q30KQ7 82 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 NRN1Q9NPD7 142 aa11.46□□□□□ -0.57
TCOF1-202ENST00000377797 SH2D1AO60880 128 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 SNCGO76070 127 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 TMEM249Q2WGJ8 235 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 SLC25A34Q6PIV7 304 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 LYZL1Q6UWQ5 148 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 RNF182Q8N6D2 247 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 HIST1H2BLQ99880 126 aa11.46□□□□□ -0.58
TCOF1-202ENST00000377797 CDSNQ15517 529 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 F2Z2F3 143 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 K7EIM0 57 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 ERCC8Q13216 396 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 C11orf52Q96A22 123 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 HIST3H2BBQ8N257 126 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 Q8N9W7 124 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 LEPP41159 167 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 PLP1P60201 277 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 LMO4P61968 165 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 STHQ8IWL8 128 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 CPAMD8Q8IZJ3 1885 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 LINC00477Q96M19 166 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 TMEM14CQ9P0S9 112 aa11.45□□□□□ -0.58
TCOF1-202ENST00000377797 IGKV1OR2-108A0A075B7D4 117 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 ZNF502Q8TBZ5 544 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 EPG5Q9HCE0 2579 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 SIRPDQ9H106 197 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 I3L2K1 104 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 FABP2P12104 132 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 BLCAPP62952 87 aa11.44□□□□□ -0.58
TCOF1-202ENST00000377797 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-202ENST00000377797 LINC00614P0C842 121 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 KMT2EQ8IZD2 1858 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 HOXA3O43365 443 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-202ENST00000377797 PPP1R17O96001 155 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 ACTL10Q5JWF8 245 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 C1orf194Q5T5A4 169 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 TMEM256Q8N2U0 113 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 LY6G5BQ8NDX9 201 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 EIF4EBP1Q13541 118 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-202ENST00000377797 ZNF295-AS1Q8N0V1 137 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 SMIM12Q96EX1 92 aa11.43□□□□□ -0.58
TCOF1-202ENST00000377797 BPTFQ12830 3046 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 ZNF414Q96IQ9 312 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 MRPL36Q9P0J6 103 aaKnown RBP11.42□□□□□ -0.58
TCOF1-202ENST00000377797 NDUFA4O00483 81 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 AMBPP02760 352 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 PPBPP02775 128 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 OR10J3Q5JRS4 329 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 MORN5Q5VZ52 161 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 402.2 ms