RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMEM14CQ9P0S9 112 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 APLNQ9ULZ1 77 aa12.04□□□□□ -0.48
HMGN4-201ENST00000377575 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
HMGN4-201ENST00000377575 KMT2AQ03164 3969 aa12.03□□□□□ -0.48
HMGN4-201ENST00000377575 TRAV12-2A0A075B6T6 113 aa12.03□□□□□ -0.48
HMGN4-201ENST00000377575 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
HMGN4-201ENST00000377575 PTTG1O95997 202 aa12.03□□□□□ -0.48
HMGN4-201ENST00000377575 CDKN1BP46527 198 aa12.03□□□□□ -0.48
HMGN4-201ENST00000377575 ATP5SQ99766 215 aa12.03□□□□□ -0.48
HMGN4-201ENST00000377575 WDR61Q9GZS3 305 aaKnown RBP12.03□□□□□ -0.48
HMGN4-201ENST00000377575 PDE6HQ13956 83 aa12.02□□□□□ -0.49
HMGN4-201ENST00000377575 MRPL53Q96EL3 112 aaKnown RBP12.02□□□□□ -0.49
HMGN4-201ENST00000377575 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
HMGN4-201ENST00000377575 HSPB11Q9Y547 144 aa12.02□□□□□ -0.49
HMGN4-201ENST00000377575 TRBV19A0A075B6N1 114 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 ZNF705GA8MUZ8 300 aaPredicted RBP12.01□□□□□ -0.49
HMGN4-201ENST00000377575 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
HMGN4-201ENST00000377575 HIST1H1EP10412 219 aaKnown RBP12.01□□□□□ -0.49
HMGN4-201ENST00000377575 TSPOP30536 169 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 OXA1LQ15070 435 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 GCSAMLQ5JQS6 135 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 LINC01587Q99440 93 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 NDUFAF3Q9BU61 184 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 MRPL32Q9BYC8 188 aaKnown RBP12.01□□□□□ -0.49
HMGN4-201ENST00000377575 MBD2Q9UBB5 411 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 TIMM9Q9Y5J7 89 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 ALG5Q9Y673 324 aa12.01□□□□□ -0.49
HMGN4-201ENST00000377575 PRAC2D3DTV9 90 aa12□□□□□ -0.49
HMGN4-201ENST00000377575 RPL12P30050 165 aaKnown RBP12□□□□□ -0.49
HMGN4-201ENST00000377575 DAD1P61803 113 aa12□□□□□ -0.49
HMGN4-201ENST00000377575 RPP25LQ8N5L8 163 aaKnown RBP12□□□□□ -0.49
HMGN4-201ENST00000377575 C20orf144Q9BQM9 153 aa12□□□□□ -0.49
HMGN4-201ENST00000377575 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
HMGN4-201ENST00000377575 PRELID1Q9Y255 219 aa12□□□□□ -0.49
HMGN4-201ENST00000377575 LYRM9A8MSI8 78 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 IFNA5P01569 189 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 PYYP10082 97 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 TAS2R60P59551 318 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 SCGB1C1Q8TD33 95 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 BLNKQ8WV28 456 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 FAM210BQ96KR6 192 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 ODF3Q96PU9 254 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 AAMDCQ9H7C9 122 aa11.99□□□□□ -0.49
HMGN4-201ENST00000377575 NPIPB6E9PJ23 425 aa11.98□□□□□ -0.49
HMGN4-201ENST00000377575 H7BYZ3 331 aa11.98□□□□□ -0.49
HMGN4-201ENST00000377575 LEPP41159 167 aa11.98□□□□□ -0.49
HMGN4-201ENST00000377575 MIR17HGQ75NE6 70 aa11.98□□□□□ -0.49
HMGN4-201ENST00000377575 C16orf74Q96GX8 76 aa11.98□□□□□ -0.49
HMGN4-201ENST00000377575 NDUFB4O95168 129 aa11.97□□□□□ -0.49
HMGN4-201ENST00000377575 FAM167A-AS1Q96KT0 104 aa11.97□□□□□ -0.49
HMGN4-201ENST00000377575 SMIM3Q9BZL3 60 aa11.97□□□□□ -0.49
HMGN4-201ENST00000377575 FUT9Q9Y231 359 aa11.97□□□□□ -0.49
HMGN4-201ENST00000377575 M0R3E3 92 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 PRM2P04554 102 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 HTN1P15515 57 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 HTN3P15516 51 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 FFAR4Q5NUL3 377 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 GFI1BQ5VTD9 330 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 ZNF493Q6ZR52 646 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.49
HMGN4-201ENST00000377575 PAXXQ9BUH6 204 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 PARD6GQ9BYG4 376 aaPredicted RBP11.96□□□□□ -0.49
HMGN4-201ENST00000377575 MED28Q9H204 178 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
HMGN4-201ENST00000377575 VPS13DQ5THJ4 4388 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 OR7C2O60412 319 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 NBEAP1P0C6P0 100 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 P0DMU3 169 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 FAM231AP0DMU4 169 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 CT45A10P0DMU9 189 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
HMGN4-201ENST00000377575 EPPK1P58107 5090 aaKnown RBP11.95□□□□□ -0.5
HMGN4-201ENST00000377575 DNAH6Q9C0G6 4158 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 OR10J4P0C629 311 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 AZU1P20160 251 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 TAS2R45P59539 299 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 ICAM4Q14773 271 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 KIR3DS1Q14943 382 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 LINC00477Q96M19 166 aa11.94□□□□□ -0.5
HMGN4-201ENST00000377575 J3KRW8 73 aa11.93□□□□□ -0.5
HMGN4-201ENST00000377575 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
HMGN4-201ENST00000377575 RNASE8Q8TDE3 154 aaKnown RBP11.93□□□□□ -0.5
HMGN4-201ENST00000377575 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
HMGN4-201ENST00000377575 ASB13Q8WXK3 278 aa11.93□□□□□ -0.5
HMGN4-201ENST00000377575 FXYD5Q96DB9 178 aa11.93□□□□□ -0.5
HMGN4-201ENST00000377575 TIMM8BQ9Y5J9 83 aaPredicted RBP11.93□□□□□ -0.5
HMGN4-201ENST00000377575 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
HMGN4-201ENST00000377575 DEFB130BP0DP73 79 aa11.92□□□□□ -0.5
HMGN4-201ENST00000377575 DEFB130AP0DP74 79 aa11.92□□□□□ -0.5
HMGN4-201ENST00000377575 UBE2L3P68036 154 aaKnown RBP11.92□□□□□ -0.5
HMGN4-201ENST00000377575 FCN2Q15485 313 aa11.92□□□□□ -0.5
HMGN4-201ENST00000377575 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
HMGN4-201ENST00000377575 TRAV12-3A0A0B4J271 114 aa11.91□□□□□ -0.5
HMGN4-201ENST00000377575 ERCC8Q13216 396 aa11.91□□□□□ -0.5
HMGN4-201ENST00000377575 ZNF266Q14584 549 aa11.91□□□□□ -0.5
HMGN4-201ENST00000377575 ACOT6Q3I5F7 207 aaPredicted RBP11.91□□□□□ -0.5
HMGN4-201ENST00000377575 TMEM78Q5T7P6 136 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms